Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC083806.1-201ENST00000468934 316 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 SIAH1P1-201ENST00000479411 923 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AL390198.2-201ENST00000510553 222 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 RN7SKP24-201ENST00000515888 284 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 RNU6-976P-201ENST00000516086 111 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 RNU6-566P-201ENST00000516790 107 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC024224.1-201ENST00000538284 609 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC023968.1-201ENST00000560719 475 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 MIR4790-201ENST00000577799 79 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 MIR3135A-201ENST00000578460 77 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 SNORD96A-201ENST00000606577 79 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AC090510.2-201ENST00000617465 629 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 SNORA16A-202ENST00000628458 135 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 PFKM-232ENST00000629846 381 ntTSL 4 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 U6.114-201ENST00000636407 96 ntBASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
LIMD1Q9UGP4 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC005839.1-201ENST00000624148 3213 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 CYCSP17-201ENST00000407870 315 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 MIR1204-201ENST00000408388 67 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 OR2AS1P-201ENST00000427827 319 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 PSMA6P3-201ENST00000428242 164 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 FTH1P1-201ENST00000437933 532 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AL731563.1-201ENST00000442202 214 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 DHFRP3-201ENST00000455595 559 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC079168.1-201ENST00000458741 345 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 RPL7P51-201ENST00000490532 749 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 FTH1P8-201ENST00000498161 514 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC103843.2-201ENST00000530523 682 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AP000857.1-201ENST00000532151 543 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AL355598.1-201ENST00000604169 202 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC007938.3-201ENST00000604965 623 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AL031666.3-201ENST00000609320 1006 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AP000843.1-201ENST00000624880 701 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 AL445437.1-201ENST00000623157 3087 ntBASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LIMD1Q9UGP4 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 AL138713.1-201ENST00000624026 2130 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 RNU6-1188P-201ENST00000363795 107 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 RNU6-82P-201ENST00000363970 107 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 Y_RNA.212-201ENST00000364177 102 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 MIR19A-201ENST00000384878 82 ntBASIC6.97□□□□□ -1.29
LIMD1Q9UGP4 SSXP10-201ENST00000402595 565 ntBASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms