Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC090151.1-201ENST00000520784 730 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC022790.1-201ENST00000522872 204 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 MTCO1P49-201ENST00000523429 802 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC069240.1-201ENST00000548774 375 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 MIR4429-201ENST00000580105 73 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 RNU4-89P-201ENST00000607443 133 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 MIR92B-201ENST00000607575 96 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 MIR6875-201ENST00000617506 72 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AL645927.2-201ENST00000618350 349 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC010608.2-201ENST00000624830 470 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC009452.1-201ENST00000640823 606 ntBASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.38□□□□□ -1.71
HPS4Q9NQG7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 RNU1-85P-201ENST00000364127 164 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AL357078.2-201ENST00000416486 427 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 NPM1P24-201ENST00000428039 894 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 RN7SL542P-201ENST00000467147 294 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 TPT1P3-201ENST00000492841 512 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AC008694.2-201ENST00000517591 306 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AL161713.1-201ENST00000555538 145 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 RPL23AP97-201ENST00000568955 471 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 RN7SL703P-201ENST00000578485 302 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 BNIP3P33-201ENST00000598912 569 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 MIR1264-201ENST00000616374 69 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AC139769.3-201ENST00000618383 175 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 CDRT1-208ENST00000630868 794 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AL356489.2-201ENST00000566968 3528 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HPS4Q9NQG7 AC095050.2-201ENST00000510748 1458 ntBASIC4.37□□□□□ -1.71
HPS4Q9NQG7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 ZNF90P1-201ENST00000480493 1951 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC007529.1-201ENST00000418574 2178 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 RNA5SP52-201ENST00000362448 134 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 SNORA62.2-201ENST00000364672 152 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 RNU11-4P-201ENST00000391149 133 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 ENSAP1-201ENST00000392855 326 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC013404.1-201ENST00000413068 249 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 BX119904.1-201ENST00000432026 348 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 CEACAMP1-201ENST00000434624 1035 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 MTND4P15-201ENST00000437913 1033 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 VN1R105P-201ENST00000486595 910 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC025445.1-201ENST00000502728 300 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 FTH1P21-201ENST00000512179 511 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 RN7SKP141-201ENST00000516167 338 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 SNORA67.7-201ENST00000516664 135 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC023632.4-201ENST00000517783 191 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 OR8K2P-201ENST00000524645 927 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 MIR4286-201ENST00000580651 93 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC078899.5-201ENST00000612475 178 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AL353726.1-201ENST00000614041 1000 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AL356121.2-201ENST00000624715 780 ntBASIC4.36□□□□□ -1.71
HPS4Q9NQG7 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HPS4Q9NQG7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms