Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC8.49□□□□□ -1.05
RTN4Q9NQC3 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC144833.1-201ENST00000567953 4089 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 RNU6-434P-201ENST00000384376 107 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 RNU6-1127P-201ENST00000384580 107 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 RNU6-882P-201ENST00000391025 103 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 RNA5SP111-201ENST00000411386 101 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AL451081.2-201ENST00000448115 933 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC128716.1-201ENST00000475129 166 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 VN1R104P-201ENST00000505115 1009 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 OR7E85P-201ENST00000512164 985 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC090151.1-201ENST00000520784 730 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 OR4N1P-201ENST00000554847 949 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC007151.1-201ENST00000572774 483 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 BDH2P1-201ENST00000602288 736 ntBASIC8.48□□□□□ -1.05
RTN4Q9NQC3 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
RTN4Q9NQC3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC011455.2-201ENST00000599320 3336 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AL031985.1-201ENST00000392713 418 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 OFD1P1Y-201ENST00000411756 1225 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 RPL34P19-201ENST00000415903 342 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC119751.6-201ENST00000416712 186 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 CELSR3-AS1-201ENST00000421275 196 ntTSL 2 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 HMGB1P27-201ENST00000431429 603 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 RPS15AP27-201ENST00000449183 343 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 UBE2R2-AS1-201ENST00000454429 647 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC090686.1-201ENST00000481577 749 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 VN1R105P-201ENST00000486595 910 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC233724.10-201ENST00000510454 409 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 RNU6-123P-201ENST00000516163 102 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 RNU6-256P-201ENST00000516747 97 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 RNU6-566P-201ENST00000516790 107 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 HMGB1P19-201ENST00000517578 577 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC110741.1-201ENST00000520149 582 ntTSL 3 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AP005597.4-201ENST00000526762 229 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AL049779.3-201ENST00000557141 606 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 APOOP1-201ENST00000604695 592 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC009686.2-201ENST00000607017 577 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AL356289.1-201ENST00000635446 743 ntTSL 3 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 AP003175.1-201ENST00000641383 6658 ntBASIC8.47□□□□□ -1.05
RTN4Q9NQC3 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
RTN4Q9NQC3 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 AC090132.1-201ENST00000524071 1480 ntBASIC8.46□□□□□ -1.05
RTN4Q9NQC3 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
RTN4Q9NQC3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms