Protein–RNA interactions for Protein: Q9BTD8

RBM42, RNA-binding protein 42, humanhuman

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42Q9BTD8 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC9.34□□□□□ -0.91
RBM42Q9BTD8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
RBM42Q9BTD8 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RBM42Q9BTD8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RBM42Q9BTD8 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
RBM42Q9BTD8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC9.34□□□□□ -0.91
RBM42Q9BTD8 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
RBM42Q9BTD8 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
RBM42Q9BTD8 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
RBM42Q9BTD8 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 HSPA8P14-201ENST00000552265 1805 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC135776.4-201ENST00000624300 1904 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 RNA5SP394-201ENST00000364216 119 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 RNU6-651P-201ENST00000411040 105 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 FTH1P5-201ENST00000425761 545 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC009518.3-201ENST00000438972 253 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 RPL31P44-201ENST00000447680 377 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 TRAPPC2P7-201ENST00000509650 231 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 RNY3P16-201ENST00000516338 101 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 IGHVIII-26-1-201ENST00000520387 250 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AP003327.1-201ENST00000529684 127 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 EEF1A1P17-201ENST00000547505 1275 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 RBM4-213ENST00000578778 582 ntTSL 4 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC211486.4-201ENST00000621495 113 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC025034.2-201ENST00000623264 286 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC008873.1-201ENST00000625051 138 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC009948.5-201ENST00000624360 4406 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 AC010886.1-201ENST00000437380 2869 ntBASIC9.33□□□□□ -0.92
RBM42Q9BTD8 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 SLC26A5-206ENST00000393727 2270 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
RBM42Q9BTD8 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 CDY11P-201ENST00000447168 1651 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 BTK-202ENST00000372880 2248 ntTSL 2 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 FANCD2P2-201ENST00000437591 1400 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 LINC02555-201ENST00000563933 1951 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AC233981.2-201ENST00000611524 1614 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RNU6-251P-201ENST00000363235 104 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RNA5SP472-201ENST00000363868 119 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RNU6-1275P-201ENST00000391087 107 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AL359643.1-201ENST00000404109 423 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RPLP0P7-201ENST00000416050 667 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RPL3P11-201ENST00000434028 1146 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AC005094.1-201ENST00000440420 368 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RNU6-1211P-201ENST00000459179 105 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AC011476.1-201ENST00000466725 307 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AC106782.4-201ENST00000568264 210 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AL162424.1-201ENST00000602325 221 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 U2.17-201ENST00000611454 95 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AC106882.1-201ENST00000515789 2371 ntTSL 2 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 RLIMP1-201ENST00000339626 1680 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 AC011008.2-201ENST00000624866 3352 ntBASIC9.32□□□□□ -0.92
RBM42Q9BTD8 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
RBM42Q9BTD8 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms