Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.91□□□□□ -1.46
IFT140Q96RY7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
IFT140Q96RY7 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
IFT140Q96RY7 RN7SKP53-201ENST00000411337 315 ntBASIC5.91□□□□□ -1.46
IFT140Q96RY7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
IFT140Q96RY7 ARL4AP3-201ENST00000441452 574 ntBASIC5.91□□□□□ -1.46
IFT140Q96RY7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.91□□□□□ -1.46
IFT140Q96RY7 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.91□□□□□ -1.46
IFT140Q96RY7 AP003355.3-201ENST00000623465 114 ntBASIC5.91□□□□□ -1.46
IFT140Q96RY7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.91□□□□□ -1.46
IFT140Q96RY7 AC093535.2-201ENST00000624769 2326 ntBASIC5.91□□□□□ -1.46
IFT140Q96RY7 ZNF90P1-201ENST00000480493 1951 ntBASIC5.91□□□□□ -1.46
IFT140Q96RY7 AC097634.1-201ENST00000604491 2467 ntBASIC5.91□□□□□ -1.46
IFT140Q96RY7 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
IFT140Q96RY7 AC017079.2-201ENST00000416102 485 ntBASIC5.9□□□□□ -1.46
IFT140Q96RY7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC5.9□□□□□ -1.46
IFT140Q96RY7 AC233982.1-201ENST00000451247 436 ntBASIC5.9□□□□□ -1.46
IFT140Q96RY7 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.9□□□□□ -1.46
IFT140Q96RY7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.9□□□□□ -1.46
IFT140Q96RY7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
IFT140Q96RY7 AC023161.2-201ENST00000551218 780 ntBASIC5.9□□□□□ -1.46
IFT140Q96RY7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.9□□□□□ -1.46
IFT140Q96RY7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.9□□□□□ -1.46
IFT140Q96RY7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.9□□□□□ -1.46
IFT140Q96RY7 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
IFT140Q96RY7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
IFT140Q96RY7 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
IFT140Q96RY7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
IFT140Q96RY7 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.46
IFT140Q96RY7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
IFT140Q96RY7 AL136131.1-201ENST00000406079 803 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.9□□□□□ -1.47
IFT140Q96RY7 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC5.9□□□□□ -1.47
IFT140Q96RY7 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.9□□□□□ -1.47
IFT140Q96RY7 KC877373.1-201ENST00000479066 408 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 AC012123.2-201ENST00000485809 248 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
IFT140Q96RY7 AC017037.1-201ENST00000508460 471 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 OR5M7P-201ENST00000526140 972 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 AC092747.2-201ENST00000545069 983 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC5.9□□□□□ -1.47
IFT140Q96RY7 MIR7106-201ENST00000612419 65 ntBASIC5.9□□□□□ -1.47
IFT140Q96RY7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC5.9□□□□□ -1.47
IFT140Q96RY7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.89□□□□□ -1.47
IFT140Q96RY7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
IFT140Q96RY7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 AC097262.1-201ENST00000452559 548 ntBASIC5.89□□□□□ -1.47
IFT140Q96RY7 RNA5SP103-201ENST00000459503 118 ntBASIC5.89□□□□□ -1.47
IFT140Q96RY7 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 AC110794.1-201ENST00000505816 425 ntBASIC5.89□□□□□ -1.47
IFT140Q96RY7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 AC027281.1-201ENST00000574178 758 ntBASIC5.89□□□□□ -1.47
IFT140Q96RY7 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.89□□□□□ -1.47
IFT140Q96RY7 AL732618.1-201ENST00000623251 301 ntBASIC5.89□□□□□ -1.47
IFT140Q96RY7 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 Z83843.1-201ENST00000604070 3685 ntBASIC5.88□□□□□ -1.47
IFT140Q96RY7 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 HMGB3P20-201ENST00000417997 600 ntBASIC5.88□□□□□ -1.47
IFT140Q96RY7 HIGD1AP12-201ENST00000427832 281 ntBASIC5.88□□□□□ -1.47
IFT140Q96RY7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.88□□□□□ -1.47
IFT140Q96RY7 AC004024.1-201ENST00000549244 247 ntBASIC5.88□□□□□ -1.47
IFT140Q96RY7 AL163642.2-201ENST00000604722 1019 ntBASIC5.88□□□□□ -1.47
IFT140Q96RY7 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.88□□□□□ -1.47
IFT140Q96RY7 AC011503.2-201ENST00000594230 1500 ntBASIC5.88□□□□□ -1.47
IFT140Q96RY7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
IFT140Q96RY7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
IFT140Q96RY7 SMG1P4-204ENST00000523028 4131 ntBASIC5.87□□□□□ -1.47
IFT140Q96RY7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT140Q96RY7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
IFT140Q96RY7 TRBV24OR9-2-201ENST00000416632 435 ntBASIC5.87□□□□□ -1.47
IFT140Q96RY7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC5.87□□□□□ -1.47
IFT140Q96RY7 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
IFT140Q96RY7 RPS3AP43-201ENST00000479743 781 ntBASIC5.87□□□□□ -1.47
IFT140Q96RY7 UBA52P3-201ENST00000491303 382 ntBASIC5.87□□□□□ -1.47
IFT140Q96RY7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.87□□□□□ -1.47
IFT140Q96RY7 AC027309.2-201ENST00000520566 192 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms