Protein–RNA interactions for Protein: Q8WUD4

CCDC12, Coiled-coil domain-containing protein 12, humanhuman

Predicted RBP Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12Q8WUD4 RNU1-64P-201ENST00000365443 163 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 RNU6-225P-201ENST00000384613 103 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 HMGN2P8-201ENST00000391458 268 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 RN7SKP156-201ENST00000410308 342 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC092017.2-201ENST00000427600 362 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 HIGD1AP12-201ENST00000427832 281 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 RN7SL93P-201ENST00000463035 293 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC091959.2-201ENST00000477363 321 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 SCARNA14-201ENST00000516903 136 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC107982.3-201ENST00000584957 985 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC025946.2-201ENST00000603398 234 ntBASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC12Q8WUD4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 MTND2P15-201ENST00000418575 892 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 AL139247.1-201ENST00000422768 325 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 PPIAP17-201ENST00000438507 471 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 AC004069.2-201ENST00000505438 1114 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 RAC1P2-201ENST00000511164 579 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 RNU6-347P-201ENST00000516658 105 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 AC092851.1-201ENST00000535964 478 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 AL020997.2-201ENST00000602607 184 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 SNORA62.6-201ENST00000606322 83 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 LINC00561-201ENST00000565815 2738 ntBASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC12Q8WUD4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC007342.7-201ENST00000624610 2337 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 RNU6-673P-201ENST00000365084 104 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 RNA5SP424-201ENST00000390988 115 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 OR6K4P-201ENST00000423179 955 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 RPS6P12-201ENST00000432491 726 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 MTND4LP31-201ENST00000514859 294 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 RN7SKP209-201ENST00000516888 304 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 MIR5187-201ENST00000583479 76 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AL390816.3-201ENST00000604527 1066 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC019131.2-201ENST00000609071 870 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 AC024560.2-201ENST00000507981 1497 ntBASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC12Q8WUD4 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC12Q8WUD4 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC12Q8WUD4 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC12Q8WUD4 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CCDC12Q8WUD4 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC12Q8WUD4 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC12Q8WUD4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC12Q8WUD4 RN7SKP159-201ENST00000410657 292 ntBASIC4.33□□□□□ -1.72
CCDC12Q8WUD4 TCEA1P2-201ENST00000420496 906 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms