Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
LMO3Q8TAP4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
LMO3Q8TAP4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.55□□□□□ -1.68
LMO3Q8TAP4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.55□□□□□ -1.68
LMO3Q8TAP4 AC021242.1-201ENST00000507315 2035 ntBASIC4.55□□□□□ -1.68
LMO3Q8TAP4 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 CCT8P1-201ENST00000413611 1657 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 MTND4P5-201ENST00000435821 1374 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 DDX43P2-201ENST00000604753 1354 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 RNU6-636P-201ENST00000384598 107 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 SNORD65-201ENST00000391079 73 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 NPM1P38-201ENST00000403835 865 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 RNU2-17P-201ENST00000410290 190 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 CYCSP10-201ENST00000417973 294 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 BTF3P9-201ENST00000418784 283 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 MTND1P20-201ENST00000430341 950 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 RPL23AP89-201ENST00000439324 255 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC011037.1-201ENST00000483964 558 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC092593.2-201ENST00000513866 913 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 IFITM8P-201ENST00000522529 394 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 OR4A2P-201ENST00000527276 913 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC007599.1-201ENST00000568688 1174 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC104785.1-201ENST00000603220 588 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AL158042.1-201ENST00000605338 460 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AL138478.1-201ENST00000612252 832 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC013470.4-201ENST00000619978 986 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC123767.1-202ENST00000620407 817 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC011944.2-201ENST00000624440 683 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 AC053481.2-202ENST00000582394 1500 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
LMO3Q8TAP4 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.54□□□□□ -1.68
LMO3Q8TAP4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC015813.6-201ENST00000624409 5808 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MAPK10-253ENST00000641010 4072 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 IGKV7-3-201ENST00000357453 298 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AL161909.1-201ENST00000397390 712 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MIR1179-201ENST00000408703 91 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 RN7SKP182-201ENST00000410772 298 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 XKRYP4-201ENST00000414395 483 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 RPS3AP37-201ENST00000419176 745 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 PNRC2P1-201ENST00000423940 420 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AL390023.1-201ENST00000428836 262 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AL365396.1-201ENST00000430854 671 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 UBE2D3P1-201ENST00000436669 444 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 XKRYP5-201ENST00000449659 483 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC104849.1-201ENST00000462623 405 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC109327.1-201ENST00000471666 403 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MTND2P14-201ENST00000482139 351 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC093824.1-201ENST00000508796 343 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC087897.1-201ENST00000550134 156 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 PSMB7P1-201ENST00000556349 514 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.53□□□□□ -1.68
LMO3Q8TAP4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms