Protein–RNA interactions for Protein: Q16586

SGCA, Alpha-sarcoglycan, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCAQ16586 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SGCAQ16586 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SGCAQ16586 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.69□□□□□ -1.82
SGCAQ16586 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCAQ16586 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SGCAQ16586 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.68□□□□□ -1.82
SGCAQ16586 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCAQ16586 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.68□□□□□ -1.82
SGCAQ16586 RNA5SP322-201ENST00000363617 119 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 RNU1-32P-201ENST00000363937 159 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 RNU6-244P-201ENST00000391028 104 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.68□□□□□ -1.82
SGCAQ16586 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.68□□□□□ -1.82
SGCAQ16586 RNU2-37P-201ENST00000410695 177 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 RN7SKP182-201ENST00000410772 298 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 AC048351.1-201ENST00000420064 602 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 FAR2P4-202ENST00000425399 584 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC023141.6-201ENST00000429418 337 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.68□□□□□ -1.82
SGCAQ16586 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCAQ16586 MTND2P21-201ENST00000436242 1042 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.68□□□□□ -1.82
SGCAQ16586 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.68□□□□□ -1.82
SGCAQ16586 AC009963.2-201ENST00000453431 138 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCAQ16586 CFTRP1-201ENST00000456646 183 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC092691.2-201ENST00000461787 803 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC109327.1-201ENST00000471666 403 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC006517.1-201ENST00000480485 328 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 OR52A4P-202ENST00000481634 799 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 RN7SL691P-201ENST00000494487 301 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.68□□□□□ -1.82
SGCAQ16586 MTCO1P31-201ENST00000506355 492 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.68□□□□□ -1.82
SGCAQ16586 AC105233.3-201ENST00000531125 744 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 ZNF192P1-203ENST00000565888 810 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 MIR5047-201ENST00000579212 100 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 AP001180.3-201ENST00000582221 145 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.68□□□□□ -1.82
SGCAQ16586 ARF4P1-201ENST00000605447 541 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC092653.1-201ENST00000608509 531 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC064801.1-201ENST00000612025 407 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 CR589904.2-201ENST00000612533 440 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 AC090246.1-201ENST00000616499 426 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.68□□□□□ -1.82
SGCAQ16586 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SGCAQ16586 AL592494.2-201ENST00000425455 1548 ntBASIC3.68□□□□□ -1.82
SGCAQ16586 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
SGCAQ16586 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SGCAQ16586 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.67□□□□□ -1.82
SGCAQ16586 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SGCAQ16586 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
SGCAQ16586 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.67□□□□□ -1.82
SGCAQ16586 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SGCAQ16586 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SGCAQ16586 RNU6-666P-201ENST00000363499 107 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 RNA5SP366-201ENST00000365454 123 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCAQ16586 Z86062.1-201ENST00000406773 777 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AP000357.1-201ENST00000409926 1165 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 RNA5SP306-201ENST00000411087 107 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AL592293.2-201ENST00000422292 996 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 RPL23AP38-201ENST00000423801 469 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC115285.1-201ENST00000424879 736 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SGCAQ16586 NPM1P24-201ENST00000428039 894 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 COX6B1P7-201ENST00000430845 235 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.67□□□□□ -1.82
SGCAQ16586 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCAQ16586 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCAQ16586 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCAQ16586 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCAQ16586 AC041039.1-201ENST00000485656 536 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCAQ16586 SUMO1P1-201ENST00000497904 306 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.67□□□□□ -1.82
SGCAQ16586 AC108475.1-201ENST00000507880 950 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC108120.2-201ENST00000512973 294 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCAQ16586 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCAQ16586 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.67□□□□□ -1.82
SGCAQ16586 RPL23AP87-202ENST00000573039 466 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC022655.2-201ENST00000577280 318 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 MIR4284-201ENST00000578924 81 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCAQ16586 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.67□□□□□ -1.82
SGCAQ16586 AC242628.1-201ENST00000606810 391 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC012557.1-201ENST00000607115 611 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AL118556.2-201ENST00000614375 824 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC107308.1-201ENST00000615897 301 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC003001.2-201ENST00000616294 831 ntBASIC3.67□□□□□ -1.82
SGCAQ16586 AC010435.1-201ENST00000623353 1177 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms