Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 PGBD4P4-201ENST00000509673 613 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 MTND6P2-201ENST00000512226 524 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.87□□□□□ -1.63
CLRN1P58418 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 SCARNA16.4-201ENST00000516956 187 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 OR5M7P-201ENST00000526140 972 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC013828.2-201ENST00000532487 235 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 MIR4505-201ENST00000582238 73 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 SNORD39.3-201ENST00000584451 71 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 MIR7853-201ENST00000584820 132 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 ELOCP28-201ENST00000590044 317 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.87□□□□□ -1.63
CLRN1P58418 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.87□□□□□ -1.63
CLRN1P58418 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 BNIP3P8-201ENST00000597863 560 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC027243.2-201ENST00000602530 724 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AL355816.1-201ENST00000607951 118 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 AC131902.3-201ENST00000611767 581 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AC090970.3-201ENST00000612566 866 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 MIR6861-201ENST00000618657 64 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 AC073869.8-201ENST00000641806 335 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 AC133552.1-201ENST00000569988 4007 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.87□□□□□ -1.63
CLRN1P58418 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 AC083899.1-201ENST00000454465 3819 ntBASIC4.87□□□□□ -1.63
CLRN1P58418 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.87□□□□□ -1.63
CLRN1P58418 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLRN1P58418 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.86□□□□□ -1.63
CLRN1P58418 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CLRN1P58418 USP9YP4-201ENST00000424401 1745 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 AL606537.1-201ENST00000607258 2011 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 OR4A15-201ENST00000314706 1035 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CLRN1P58418 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 RPL17P50-201ENST00000396131 546 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 RPS3AP23-201ENST00000401762 784 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AL078604.1-201ENST00000404609 466 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC008280.1-201ENST00000418851 412 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.86□□□□□ -1.63
CLRN1P58418 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 MTND1P2-201ENST00000430604 821 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 VN1R54P-201ENST00000435210 1049 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 SUMO2P3-201ENST00000438311 288 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 PCNPP2-201ENST00000441651 455 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC073109.1-201ENST00000445066 978 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 GDI2P2-201ENST00000445131 608 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC073909.1-201ENST00000447112 999 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 RPL39P6-201ENST00000448289 150 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 USP9YP12-201ENST00000450481 570 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC003071.1-201ENST00000451219 789 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 YWHAEP1-201ENST00000453697 763 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 HMGN3P1-201ENST00000453847 193 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.86□□□□□ -1.63
CLRN1P58418 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC4.86□□□□□ -1.63
CLRN1P58418 AC091912.1-201ENST00000511351 248 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.86□□□□□ -1.63
CLRN1P58418 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLRN1P58418 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.86□□□□□ -1.63
CLRN1P58418 RNU6-314P-201ENST00000516574 104 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.86□□□□□ -1.63
CLRN1P58418 AP004247.1-201ENST00000531556 1289 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 697.3 ms