Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC011742.1-201ENST00000431448 434 ntBASIC3.83□□□□□ -1.8
LIM2P55344 YWHAEP5-201ENST00000431545 765 ntBASIC3.83□□□□□ -1.8
LIM2P55344 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.83□□□□□ -1.8
LIM2P55344 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.83□□□□□ -1.8
LIM2P55344 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.83□□□□□ -1.8
LIM2P55344 CBX1P4-201ENST00000439415 457 ntBASIC3.83□□□□□ -1.8
LIM2P55344 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.83□□□□□ -1.8
LIM2P55344 AC114755.5-201ENST00000447760 831 ntBASIC3.83□□□□□ -1.8
LIM2P55344 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.83□□□□□ -1.8
LIM2P55344 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC3.83□□□□□ -1.8
LIM2P55344 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.83□□□□□ -1.8
LIM2P55344 RNA5SP315-201ENST00000516340 116 ntBASIC3.83□□□□□ -1.8
LIM2P55344 RNA5SP312-201ENST00000517068 116 ntBASIC3.83□□□□□ -1.8
LIM2P55344 VTA1P2-201ENST00000520205 911 ntBASIC3.83□□□□□ -1.8
LIM2P55344 OSBPL9P3-201ENST00000534523 595 ntBASIC3.83□□□□□ -1.8
LIM2P55344 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIM2P55344 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.83□□□□□ -1.8
LIM2P55344 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.83□□□□□ -1.8
LIM2P55344 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.83□□□□□ -1.8
LIM2P55344 AC079148.1-201ENST00000565944 819 ntBASIC3.83□□□□□ -1.8
LIM2P55344 ZNF92P3-201ENST00000596594 954 ntBASIC3.83□□□□□ -1.8
LIM2P55344 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.83□□□□□ -1.8
LIM2P55344 RPL21P136-201ENST00000605378 396 ntBASIC3.83□□□□□ -1.8
LIM2P55344 RNU4-89P-201ENST00000607443 133 ntBASIC3.83□□□□□ -1.8
LIM2P55344 MIR6867-201ENST00000610636 67 ntBASIC3.83□□□□□ -1.8
LIM2P55344 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIM2P55344 MIR4727-201ENST00000622232 55 ntBASIC3.83□□□□□ -1.8
LIM2P55344 AC112484.5-201ENST00000624189 228 ntBASIC3.83□□□□□ -1.8
LIM2P55344 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
LIM2P55344 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIM2P55344 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
LIM2P55344 DDX18P3-201ENST00000404856 2007 ntBASIC3.83□□□□□ -1.8
LIM2P55344 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.83□□□□□ -1.8
LIM2P55344 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
LIM2P55344 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.82□□□□□ -1.8
LIM2P55344 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.82□□□□□ -1.8
LIM2P55344 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIM2P55344 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIM2P55344 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIM2P55344 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.82□□□□□ -1.8
LIM2P55344 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
LIM2P55344 OR6K3-202ENST00000368146 996 ntBASIC3.82□□□□□ -1.8
LIM2P55344 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.82□□□□□ -1.8
LIM2P55344 RNU6-317P-201ENST00000384031 107 ntBASIC3.82□□□□□ -1.8
LIM2P55344 MIR92A2-201ENST00000385299 75 ntBASIC3.82□□□□□ -1.8
LIM2P55344 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC3.82□□□□□ -1.8
LIM2P55344 AL606495.1-201ENST00000422100 813 ntBASIC3.82□□□□□ -1.8
LIM2P55344 OR5BE1P-201ENST00000425977 939 ntBASIC3.82□□□□□ -1.8
LIM2P55344 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.82□□□□□ -1.8
LIM2P55344 TPMTP4-201ENST00000450749 678 ntBASIC3.82□□□□□ -1.8
LIM2P55344 AC104687.1-201ENST00000485829 412 ntBASIC3.82□□□□□ -1.8
LIM2P55344 RN7SL271P-201ENST00000487601 295 ntBASIC3.82□□□□□ -1.8
LIM2P55344 RPL31P61-201ENST00000496160 376 ntBASIC3.82□□□□□ -1.8
LIM2P55344 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.82□□□□□ -1.8
LIM2P55344 RNU6-1102P-201ENST00000516149 96 ntBASIC3.82□□□□□ -1.8
LIM2P55344 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.82□□□□□ -1.8
LIM2P55344 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.82□□□□□ -1.8
LIM2P55344 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.82□□□□□ -1.8
LIM2P55344 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.82□□□□□ -1.8
LIM2P55344 AC110743.1-201ENST00000584870 478 ntBASIC3.82□□□□□ -1.8
LIM2P55344 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC3.82□□□□□ -1.8
LIM2P55344 AL512506.1-201ENST00000613918 449 ntBASIC3.82□□□□□ -1.8
LIM2P55344 AL158196.1-201ENST00000616786 434 ntBASIC3.82□□□□□ -1.8
LIM2P55344 AL773545.4-201ENST00000637262 310 ntBASIC3.82□□□□□ -1.8
LIM2P55344 OR5BE1P-202ENST00000641168 1176 ntBASIC3.82□□□□□ -1.8
LIM2P55344 AL513478.4-201ENST00000641636 310 ntBASIC3.82□□□□□ -1.8
LIM2P55344 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIM2P55344 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIM2P55344 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
LIM2P55344 ASNSP1-201ENST00000518311 1939 ntBASIC3.82□□□□□ -1.8
LIM2P55344 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 RLIMP1-201ENST00000339626 1680 ntBASIC3.81□□□□□ -1.8
LIM2P55344 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 IQCB2P-201ENST00000401788 1633 ntBASIC3.81□□□□□ -1.8
LIM2P55344 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 CASC19-261ENST00000641853 1638 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIM2P55344 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
LIM2P55344 MTND4P11-201ENST00000417020 1058 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC092647.1-201ENST00000420654 287 ntBASIC3.81□□□□□ -1.8
LIM2P55344 MTND2P11-201ENST00000423638 648 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC009965.2-201ENST00000425328 970 ntBASIC3.81□□□□□ -1.8
LIM2P55344 NPM1P24-201ENST00000428039 894 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC091390.1-201ENST00000433904 331 ntBASIC3.81□□□□□ -1.8
LIM2P55344 RPL12P46-201ENST00000436610 195 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AL031663.1-201ENST00000437445 219 ntBASIC3.81□□□□□ -1.8
LIM2P55344 RNFT1P2-201ENST00000443064 757 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.81□□□□□ -1.8
LIM2P55344 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.81□□□□□ -1.8
LIM2P55344 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.81□□□□□ -1.8
LIM2P55344 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 IGBP1P5-201ENST00000507524 1000 ntBASIC3.81□□□□□ -1.8
LIM2P55344 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
LIM2P55344 MTCO1P35-201ENST00000515270 228 ntBASIC3.81□□□□□ -1.8
LIM2P55344 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.81□□□□□ -1.8
LIM2P55344 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.81□□□□□ -1.8
LIM2P55344 POLR2KP1-201ENST00000553226 168 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms