Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.1□□□□□ -1.75
CDH4P55283 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.1□□□□□ -1.75
CDH4P55283 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CDH4P55283 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH4P55283 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH4P55283 TBCAP1-201ENST00000436520 327 ntBASIC4.1□□□□□ -1.75
CDH4P55283 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH4P55283 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH4P55283 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH4P55283 TPMTP4-201ENST00000450749 678 ntBASIC4.1□□□□□ -1.75
CDH4P55283 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH4P55283 AC023050.1-201ENST00000498198 304 ntBASIC4.1□□□□□ -1.75
CDH4P55283 AC025554.1-201ENST00000505641 188 ntBASIC4.1□□□□□ -1.75
CDH4P55283 AC010460.1-201ENST00000507087 466 ntBASIC4.1□□□□□ -1.75
CDH4P55283 AC108157.1-201ENST00000510511 539 ntBASIC4.1□□□□□ -1.75
CDH4P55283 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH4P55283 IGLVIV-53-201ENST00000520107 367 ntBASIC4.1□□□□□ -1.75
CDH4P55283 AC022784.5-201ENST00000522241 437 ntBASIC4.1□□□□□ -1.75
CDH4P55283 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH4P55283 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH4P55283 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH4P55283 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH4P55283 AC053481.4-201ENST00000583164 216 ntBASIC4.1□□□□□ -1.75
CDH4P55283 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.1□□□□□ -1.75
CDH4P55283 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH4P55283 MTCO3P22-201ENST00000603219 784 ntBASIC4.1□□□□□ -1.75
CDH4P55283 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH4P55283 MIR6875-201ENST00000617506 72 ntBASIC4.1□□□□□ -1.75
CDH4P55283 AC095038.2-201ENST00000621464 1070 ntBASIC4.1□□□□□ -1.75
CDH4P55283 CR392039.4-201ENST00000624968 501 ntBASIC4.1□□□□□ -1.75
CDH4P55283 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH4P55283 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH4P55283 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH4P55283 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH4P55283 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH4P55283 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH4P55283 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CDH4P55283 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH4P55283 RNA5SP399-201ENST00000364003 117 ntBASIC4.09□□□□□ -1.75
CDH4P55283 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH4P55283 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH4P55283 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH4P55283 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH4P55283 RPL30P3-201ENST00000424262 333 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 MTCO1P54-201ENST00000430139 712 ntBASIC4.09□□□□□ -1.75
CDH4P55283 HIGD1AP4-201ENST00000430194 280 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 RPL34P26-201ENST00000445636 354 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH4P55283 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH4P55283 HMGB1P5-202ENST00000451497 985 ntBASIC4.09□□□□□ -1.75
CDH4P55283 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH4P55283 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 AC025445.1-201ENST00000502728 300 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH4P55283 RNA5SP154-201ENST00000516193 111 ntBASIC4.09□□□□□ -1.75
CDH4P55283 SNORA26.10-201ENST00000516427 141 ntBASIC4.09□□□□□ -1.75
CDH4P55283 RNA5SP179-201ENST00000517284 121 ntBASIC4.09□□□□□ -1.75
CDH4P55283 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH4P55283 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
CDH4P55283 BNIP3P5-201ENST00000562290 498 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AC120057.2-201ENST00000571520 271 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH4P55283 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.09□□□□□ -1.75
CDH4P55283 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.09□□□□□ -1.75
CDH4P55283 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH4P55283 AC022916.3-201ENST00000592961 742 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH4P55283 AL606490.9-201ENST00000603331 271 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AL592436.1-201ENST00000605135 558 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AL139089.1-201ENST00000620372 975 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AC124312.6-202ENST00000623624 418 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AL773545.4-201ENST00000637262 310 ntBASIC4.09□□□□□ -1.75
CDH4P55283 AL513478.4-201ENST00000641636 310 ntBASIC4.09□□□□□ -1.75
CDH4P55283 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.09□□□□□ -1.75
CDH4P55283 AL353743.4-201ENST00000422653 1547 ntBASIC4.09□□□□□ -1.75
CDH4P55283 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CDH4P55283 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CDH4P55283 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CDH4P55283 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CDH4P55283 AC008725.1-201ENST00000605123 2263 ntBASIC4.09□□□□□ -1.76
CDH4P55283 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.08□□□□□ -1.76
CDH4P55283 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CDH4P55283 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CDH4P55283 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms