Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGCS2P54868 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGCS2P54868 DSTNP2-201ENST00000504533 515 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGCS2P54868 SEC11B-201ENST00000518383 499 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.43□□□□□ -1.7
HMGCS2P54868 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AC233702.9-201ENST00000581528 203 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.43□□□□□ -1.7
HMGCS2P54868 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.43□□□□□ -1.7
HMGCS2P54868 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.43□□□□□ -1.7
HMGCS2P54868 RNU1-30P-201ENST00000606575 163 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 AL591424.2-201ENST00000617023 128 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 AC119674.1-207ENST00000641355 633 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 AC119674.1-220ENST00000641502 1048 ntBASIC4.43□□□□□ -1.7
HMGCS2P54868 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HMGCS2P54868 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
HMGCS2P54868 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
HMGCS2P54868 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
HMGCS2P54868 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
HMGCS2P54868 MTND4P21-201ENST00000453886 1357 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HMGCS2P54868 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS2P54868 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
HMGCS2P54868 LINC01355-201ENST00000566551 5444 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.42□□□□□ -1.7
HMGCS2P54868 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS2P54868 BMS1P3-201ENST00000372011 932 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 RNU6-178P-201ENST00000384631 104 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS2P54868 NCSTNP1-201ENST00000406229 144 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS2P54868 ZFAND6P1-201ENST00000434138 605 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS2P54868 AC243772.1-201ENST00000451620 410 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS2P54868 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS2P54868 COL6A4P2-205ENST00000509855 506 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 SNORA74D-201ENST00000516404 141 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 RNA5SP164-201ENST00000516533 110 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 SNORA70.24-201ENST00000517233 118 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS2P54868 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS2P54868 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS2P54868 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS2P54868 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.42□□□□□ -1.7
HMGCS2P54868 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.42□□□□□ -1.7
HMGCS2P54868 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
HMGCS2P54868 MIR7975-201ENST00000619350 68 ntBASIC4.42□□□□□ -1.7
HMGCS2P54868 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS2P54868 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS2P54868 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS2P54868 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS2P54868 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.42□□□□□ -1.7
HMGCS2P54868 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HMGCS2P54868 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 RNVU1-14-201ENST00000384770 164 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HMGCS2P54868 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 SOD2P1-201ENST00000396543 562 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS2P54868 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS2P54868 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS2P54868 AL590609.2-201ENST00000421430 368 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AL390879.2-203ENST00000426943 1121 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS2P54868 AL159987.2-201ENST00000432754 307 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS2P54868 HLA-N-201ENST00000437516 135 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 VN1R25P-201ENST00000443385 738 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 SETD6P1-201ENST00000444575 317 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS2P54868 VN1R40P-201ENST00000455196 941 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 NPM1P29-201ENST00000483112 803 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCS2P54868 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS2P54868 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.41□□□□□ -1.7
HMGCS2P54868 OR5B10P-201ENST00000532869 642 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HMGCS2P54868 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.41□□□□□ -1.7
HMGCS2P54868 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS2P54868 AC006960.3-201ENST00000561845 705 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AC124068.1-201ENST00000563131 678 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.41□□□□□ -1.7
HMGCS2P54868 CYP4A43P-201ENST00000568156 121 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.41□□□□□ -1.7
HMGCS2P54868 ELOCP35-201ENST00000604289 336 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCS2P54868 AL356094.1-201ENST00000624663 1212 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.41□□□□□ -1.7
HMGCS2P54868 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
HMGCS2P54868 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms