Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 FAM133CP-201ENST00000332869 704 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 RNU1-83P-201ENST00000363426 164 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 SNORD116-9-201ENST00000384000 95 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 SNORD116-3-201ENST00000384287 95 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 SNORD116-7-201ENST00000384404 95 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 SNORD116-5-201ENST00000384462 95 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AL592291.1-201ENST00000403830 352 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 HSPE1P16-201ENST00000426640 348 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AL390023.1-201ENST00000428836 262 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.71□□□□□ -1.5
SNRPA1P09661 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AL445567.1-201ENST00000439121 144 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 ARL4AP3-201ENST00000441452 574 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AL592437.1-201ENST00000443781 492 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 MTCO2P7-201ENST00000446518 666 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AC233982.1-201ENST00000451247 436 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 RNU7-140P-201ENST00000459546 60 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 RPS27AP17-201ENST00000463344 455 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC107015.1-201ENST00000466902 747 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 RPS3AP43-201ENST00000479743 781 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 HPRT1P2-201ENST00000505250 544 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AC008565.1-201ENST00000509046 885 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 OR5BM1P-201ENST00000512021 366 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC117532.1-201ENST00000514638 323 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 SNORA31.9-201ENST00000516429 84 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.71□□□□□ -1.5
SNRPA1P09661 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AC090515.3-201ENST00000560431 315 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC090888.1-201ENST00000561335 1141 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC5.71□□□□□ -1.5
SNRPA1P09661 SNORD39.2-201ENST00000579995 76 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.71□□□□□ -1.5
SNRPA1P09661 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 DPRXP5-201ENST00000604662 539 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 OR2BH1P-201ENST00000608850 864 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC023043.4-201ENST00000612081 449 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.71□□□□□ -1.5
SNRPA1P09661 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.71□□□□□ -1.5
SNRPA1P09661 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.71□□□□□ -1.5
SNRPA1P09661 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.71□□□□□ -1.5
SNRPA1P09661 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SNRPA1P09661 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SNRPA1P09661 RLIMP2-201ENST00000427891 1563 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SNRPA1P09661 AC104446.1-201ENST00000613728 1321 ntBASIC5.71□□□□□ -1.5
SNRPA1P09661 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.71□□□□□ -1.5
SNRPA1P09661 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
SNRPA1P09661 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNRPA1P09661 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SNRPA1P09661 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 AL121657.1-201ENST00000327215 531 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SNRPA1P09661 RNU6-244P-201ENST00000391028 104 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 ERHP2-201ENST00000402323 299 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 HMGB3P18-201ENST00000406327 590 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.7□□□□□ -1.5
SNRPA1P09661 AL358176.3-201ENST00000420757 454 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.7□□□□□ -1.5
SNRPA1P09661 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNRPA1P09661 AC093084.1-201ENST00000424233 687 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AL589823.1-201ENST00000429577 183 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SNRPA1P09661 MTCO3P5-201ENST00000433620 714 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 HMGB3P10-201ENST00000434734 572 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.7□□□□□ -1.5
SNRPA1P09661 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.7□□□□□ -1.5
SNRPA1P09661 AC092393.1-201ENST00000439625 742 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 UBE2D3P4-201ENST00000441973 436 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 AC118469.1-201ENST00000442943 488 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 MTND2P4-201ENST00000445034 1004 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.7□□□□□ -1.5
SNRPA1P09661 RPL7P19-201ENST00000469948 618 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SNRPA1P09661 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.7□□□□□ -1.5
SNRPA1P09661 RPF2P2-201ENST00000504693 896 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC5.7□□□□□ -1.5
SNRPA1P09661 HMGB3P16-201ENST00000508037 287 ntBASIC5.7□□□□□ -1.5
SNRPA1P09661 PARP4P3-201ENST00000510265 317 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms