Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 RPL31P61-201ENST00000496160 376 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 HMGB3P13-201ENST00000511263 607 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.45□□□□□ -1.7
UBE4BO95155 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.45□□□□□ -1.7
UBE4BO95155 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBE4BO95155 HAUS1P3-201ENST00000523909 662 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 AP002812.4-201ENST00000532139 286 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.45□□□□□ -1.7
UBE4BO95155 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.45□□□□□ -1.7
UBE4BO95155 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.45□□□□□ -1.7
UBE4BO95155 AC084824.1-201ENST00000550917 1005 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 HMGB3P26-201ENST00000560051 582 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
UBE4BO95155 AC017076.1-201ENST00000607613 578 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.45□□□□□ -1.7
UBE4BO95155 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.45□□□□□ -1.7
UBE4BO95155 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.45□□□□□ -1.7
UBE4BO95155 OR5BE1P-202ENST00000641168 1176 ntBASIC4.45□□□□□ -1.7
UBE4BO95155 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
UBE4BO95155 RNF6P1-201ENST00000444889 1784 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.44□□□□□ -1.7
UBE4BO95155 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
UBE4BO95155 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
UBE4BO95155 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE4BO95155 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE4BO95155 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 SNORA70C-201ENST00000384538 135 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 RNA5SP306-201ENST00000411087 107 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 MTCO3P4-201ENST00000419236 787 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 AC011742.1-201ENST00000431448 434 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 MTND2P8-201ENST00000450555 1025 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 FGF7P3-201ENST00000454645 303 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 RPL7P19-201ENST00000469948 618 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 OR52A4P-202ENST00000481634 799 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE4BO95155 MTCO1P35-201ENST00000515270 228 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.44□□□□□ -1.7
UBE4BO95155 AC084757.1-201ENST00000559987 490 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.44□□□□□ -1.7
UBE4BO95155 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.44□□□□□ -1.7
UBE4BO95155 AC025016.1-201ENST00000616746 682 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 AC103858.2-201ENST00000621471 543 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 CFTRP2-201ENST00000634304 199 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
UBE4BO95155 MTND4P31-201ENST00000425607 1343 ntBASIC4.44□□□□□ -1.7
UBE4BO95155 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
UBE4BO95155 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE4BO95155 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
UBE4BO95155 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
UBE4BO95155 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE4BO95155 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE4BO95155 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE4BO95155 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE4BO95155 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE4BO95155 OR10J6P-201ENST00000289731 930 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
UBE4BO95155 AL589826.1-201ENST00000340697 249 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 RNA5SP515-201ENST00000364570 118 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE4BO95155 RPS26P8-201ENST00000393490 348 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 ATP5F1P2-201ENST00000398143 760 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 TAF9BP2-201ENST00000400856 499 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 AL022722.2-201ENST00000402519 180 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 SNORA11C-201ENST00000408532 129 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE4BO95155 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.43□□□□□ -1.7
UBE4BO95155 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
UBE4BO95155 BX119904.1-201ENST00000432026 348 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE4BO95155 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE4BO95155 AC083863.1-201ENST00000438811 231 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE4BO95155 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE4BO95155 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE4BO95155 AC022034.3-201ENST00000471393 478 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.43□□□□□ -1.7
UBE4BO95155 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE4BO95155 MIR2116-201ENST00000517221 80 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE4BO95155 AC091516.1-201ENST00000549191 703 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 GNRHR2P1-201ENST00000555315 631 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 AC025884.1-201ENST00000556034 378 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE4BO95155 HNRNPCP4-201ENST00000571636 900 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE4BO95155 RNU4-89P-201ENST00000607443 133 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 AC003001.2-201ENST00000616294 831 ntBASIC4.43□□□□□ -1.7
UBE4BO95155 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.43□□□□□ -1.7
UBE4BO95155 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.43□□□□□ -1.7
UBE4BO95155 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
UBE4BO95155 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms