Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
MSH5O43196 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MSH5O43196 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC10.82□□□□□ -0.68
MSH5O43196 CALCOCO2-201ENST00000258947 3682 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
MSH5O43196 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
MSH5O43196 Z97832.2-201ENST00000605896 4261 ntBASIC10.82□□□□□ -0.68
MSH5O43196 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC10.82□□□□□ -0.68
MSH5O43196 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MSH5O43196 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC10.82□□□□□ -0.68
MSH5O43196 MYRFL-205ENST00000552032 3139 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
MSH5O43196 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
MSH5O43196 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
MSH5O43196 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
MSH5O43196 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC10.82□□□□□ -0.68
MSH5O43196 MALAT1-202ENST00000534336 8708 ntBASIC10.81□□□□□ -0.68
MSH5O43196 CD101-202ENST00000369470 3324 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
MSH5O43196 ZNF702P-202ENST00000434269 1966 ntBASIC10.81□□□□□ -0.68
MSH5O43196 ASB15-205ENST00000451215 2956 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
MSH5O43196 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
MSH5O43196 AL356289.3-201ENST00000640049 2669 ntBASIC10.81□□□□□ -0.68
MSH5O43196 RNU6-1272P-201ENST00000362776 107 ntBASIC10.81□□□□□ -0.68
MSH5O43196 RNA5SP234-201ENST00000363916 119 ntBASIC10.81□□□□□ -0.68
MSH5O43196 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
MSH5O43196 RBMY2FP-202ENST00000420346 1263 ntBASIC10.81□□□□□ -0.68
MSH5O43196 AC126124.1-201ENST00000426104 185 ntBASIC10.81□□□□□ -0.68
MSH5O43196 AL353754.1-201ENST00000440219 340 ntBASIC10.81□□□□□ -0.68
MSH5O43196 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC10.81□□□□□ -0.68
MSH5O43196 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC10.81□□□□□ -0.68
MSH5O43196 AC006511.1-201ENST00000470614 315 ntBASIC10.81□□□□□ -0.68
MSH5O43196 RPS27AP13-201ENST00000498403 237 ntBASIC10.81□□□□□ -0.68
MSH5O43196 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC10.81□□□□□ -0.68
MSH5O43196 RNU7-175P-201ENST00000515915 61 ntBASIC10.81□□□□□ -0.68
MSH5O43196 COX6B1P6-201ENST00000522347 255 ntBASIC10.81□□□□□ -0.68
MSH5O43196 AC100767.1-201ENST00000528178 123 ntBASIC10.81□□□□□ -0.68
MSH5O43196 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC10.81□□□□□ -0.68
MSH5O43196 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC10.81□□□□□ -0.68
MSH5O43196 AC010332.1-201ENST00000620439 97 ntBASIC10.81□□□□□ -0.68
MSH5O43196 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
MSH5O43196 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC10.81□□□□□ -0.68
MSH5O43196 FLT1-203ENST00000540678 1927 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
MSH5O43196 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC10.81□□□□□ -0.68
MSH5O43196 AC013268.3-201ENST00000262716 2324 ntBASIC10.81□□□□□ -0.68
MSH5O43196 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC10.81□□□□□ -0.68
MSH5O43196 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC10.81□□□□□ -0.68
MSH5O43196 SAP18-207ENST00000607003 2234 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
MSH5O43196 AC099654.2-201ENST00000433031 1980 ntBASIC10.81□□□□□ -0.68
MSH5O43196 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
MSH5O43196 SAGE2P-201ENST00000420011 2126 ntBASIC10.81□□□□□ -0.68
MSH5O43196 USP14-201ENST00000261601 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
MSH5O43196 AL157831.2-201ENST00000564681 3095 ntBASIC10.81□□□□□ -0.68
MSH5O43196 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
MSH5O43196 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 GLULP5-201ENST00000547831 1390 ntBASIC10.8□□□□□ -0.68
MSH5O43196 BIN2P1-201ENST00000504996 1530 ntBASIC10.8□□□□□ -0.68
MSH5O43196 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC10.8□□□□□ -0.68
MSH5O43196 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 RNU6-103P-201ENST00000363686 107 ntBASIC10.8□□□□□ -0.68
MSH5O43196 LINC01644-201ENST00000405369 984 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC10.8□□□□□ -0.68
MSH5O43196 AL590490.1-201ENST00000455599 316 ntTSL 5 BASIC10.8□□□□□ -0.68
MSH5O43196 RPL7AP26-201ENST00000488538 813 ntBASIC10.8□□□□□ -0.68
MSH5O43196 TECRP2-201ENST00000503270 928 ntBASIC10.8□□□□□ -0.68
MSH5O43196 PPP1R1AP1-201ENST00000525622 425 ntBASIC10.8□□□□□ -0.68
MSH5O43196 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC10.8□□□□□ -0.68
MSH5O43196 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC10.8□□□□□ -0.68
MSH5O43196 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC10.8□□□□□ -0.68
MSH5O43196 AC018523.1-201ENST00000534211 512 ntBASIC10.8□□□□□ -0.68
MSH5O43196 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC10.8□□□□□ -0.68
MSH5O43196 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC10.8□□□□□ -0.68
MSH5O43196 OR6L2P-201ENST00000608207 925 ntBASIC10.8□□□□□ -0.68
MSH5O43196 AL596245.1-201ENST00000618994 362 ntBASIC10.8□□□□□ -0.68
MSH5O43196 TRIM37-214ENST00000625984 204 ntTSL 5 BASIC10.8□□□□□ -0.68
MSH5O43196 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
MSH5O43196 FAM49A-201ENST00000381323 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 AC083806.2-201ENST00000617795 2685 ntBASIC10.8□□□□□ -0.68
MSH5O43196 ZNF185-203ENST00000324823 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
MSH5O43196 SORCS1-202ENST00000344440 3009 ntTSL 5 BASIC10.79□□□□□ -0.68
MSH5O43196 AC145138.1-201ENST00000512908 2851 ntBASIC10.79□□□□□ -0.68
MSH5O43196 IRAK4-201ENST00000431837 4147 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC10.79□□□□□ -0.68
MSH5O43196 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
MSH5O43196 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 AC100810.3-201ENST00000633189 2240 ntBASIC10.79□□□□□ -0.68
MSH5O43196 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 RNU6-942P-201ENST00000363002 107 ntBASIC10.79□□□□□ -0.68
MSH5O43196 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
MSH5O43196 RNU6-440P-201ENST00000390882 105 ntBASIC10.79□□□□□ -0.68
MSH5O43196 RNA5SP297-201ENST00000391029 113 ntBASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms