Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.02□□□□□ -1.61
PHGDHO43175 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PHGDHO43175 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
PHGDHO43175 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
PHGDHO43175 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PHGDHO43175 AC021755.1-201ENST00000559747 1447 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 RNA5SP183-201ENST00000362452 119 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 RNU6-984P-201ENST00000363236 109 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 RN7SKP113-201ENST00000363891 295 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 RNU6-441P-201ENST00000384545 106 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 AL031577.2-201ENST00000404133 280 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.01□□□□□ -1.61
PHGDHO43175 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PHGDHO43175 SDCBPP2-201ENST00000424643 885 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 RPL12P46-201ENST00000436610 195 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.01□□□□□ -1.61
PHGDHO43175 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.01□□□□□ -1.61
PHGDHO43175 MTCYBP39-201ENST00000437562 491 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 AL691482.1-201ENST00000453255 87 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.01□□□□□ -1.61
PHGDHO43175 RN7SL441P-201ENST00000492388 296 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 MTCYBP17-201ENST00000503579 789 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.01□□□□□ -1.61
PHGDHO43175 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.01□□□□□ -1.61
PHGDHO43175 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 AC024940.3-201ENST00000538551 316 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.01□□□□□ -1.61
PHGDHO43175 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC5.01□□□□□ -1.61
PHGDHO43175 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.01□□□□□ -1.61
PHGDHO43175 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.01□□□□□ -1.61
PHGDHO43175 SULT1C2P1-202ENST00000562418 459 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 MTCYBP33-201ENST00000575007 1130 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 RN7SL435P-201ENST00000584418 282 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 AC107982.3-201ENST00000584957 985 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 FKBP1AP1-201ENST00000594588 318 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.01□□□□□ -1.61
PHGDHO43175 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.01□□□□□ -1.61
PHGDHO43175 AP000894.4-201ENST00000610185 483 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 AC015914.2-201ENST00000618167 288 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 AL031667.3-201ENST00000620124 655 ntBASIC5.01□□□□□ -1.61
PHGDHO43175 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.01□□□□□ -1.61
PHGDHO43175 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.01□□□□□ -1.61
PHGDHO43175 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PHGDHO43175 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5□□□□□ -1.61
PHGDHO43175 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 AL451142.2-201ENST00000429076 2090 ntBASIC5□□□□□ -1.61
PHGDHO43175 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5□□□□□ -1.61
PHGDHO43175 SNRPEP3-201ENST00000338402 276 ntBASIC5□□□□□ -1.61
PHGDHO43175 RNU1-43P-201ENST00000365052 165 ntBASIC5□□□□□ -1.61
PHGDHO43175 CUBN-201ENST00000377823 705 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 CYCSP45-201ENST00000402289 315 ntBASIC5□□□□□ -1.61
PHGDHO43175 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5□□□□□ -1.61
PHGDHO43175 RN7SKP114-201ENST00000410327 279 ntBASIC5□□□□□ -1.61
PHGDHO43175 RNU6-920P-201ENST00000410926 92 ntBASIC5□□□□□ -1.61
PHGDHO43175 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 MORF4L1P6-201ENST00000418771 268 ntBASIC5□□□□□ -1.61
PHGDHO43175 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 AC234779.1-201ENST00000425910 285 ntBASIC5□□□□□ -1.61
PHGDHO43175 CFL1P1-202ENST00000432948 411 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 CEACAMP1-201ENST00000434624 1035 ntBASIC5□□□□□ -1.61
PHGDHO43175 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 RPS26P56-201ENST00000444468 240 ntBASIC5□□□□□ -1.61
PHGDHO43175 MTND1P29-201ENST00000448112 647 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC073387.1-201ENST00000453261 709 ntBASIC5□□□□□ -1.61
PHGDHO43175 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 RN7SL174P-201ENST00000475578 289 ntBASIC5□□□□□ -1.61
PHGDHO43175 UBA52P7-201ENST00000486088 380 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 RN7SL346P-201ENST00000491561 294 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC108693.1-201ENST00000496068 432 ntBASIC5□□□□□ -1.61
PHGDHO43175 AL136038.1-201ENST00000497246 351 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 AC018797.3-201ENST00000513388 1241 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC5□□□□□ -1.61
PHGDHO43175 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5□□□□□ -1.61
PHGDHO43175 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5□□□□□ -1.61
PHGDHO43175 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PHGDHO43175 CYCSP28-201ENST00000534284 321 ntBASIC5□□□□□ -1.61
PHGDHO43175 AC005868.1-201ENST00000536421 331 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms