Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 MFAP1P1-201ENST00000442257 1255 ntBASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LINC00588Q9Y4M8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LINC00588Q9Y4M8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 AC096733.2-201ENST00000609937 1394 ntBASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 EGLN1P1-201ENST00000531623 762 ntBASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC13.24□□□□□ -0.29
LINC00588Q9Y4M8 KRT8P41-201ENST00000533985 1514 ntBASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00588Q9Y4M8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms