Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
MRPS28Q9Y2Q9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 ZNF815P-204ENST00000434898 1737 ntBASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 NEFHP1-201ENST00000412845 2629 ntBASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.65■□□□□ 0.26
MRPS28Q9Y2Q9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
MRPS28Q9Y2Q9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
MRPS28Q9Y2Q9 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
MRPS28Q9Y2Q9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
MRPS28Q9Y2Q9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 AC006333.2-201ENST00000607957 2099 ntBASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
MRPS28Q9Y2Q9 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 MKRN4P-201ENST00000444706 1521 ntBASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 AC004911.1-201ENST00000416316 871 ntBASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
MRPS28Q9Y2Q9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms