Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 AL353719.1-201ENST00000566847 864 ntBASIC26.48■■□□□ 1.83
NINLQ9Y2I6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 AC073130.3-201ENST00000624389 2278 ntBASIC26.48■■□□□ 1.83
NINLQ9Y2I6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
NINLQ9Y2I6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
NINLQ9Y2I6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 AC006011.2-201ENST00000621313 1158 ntBASIC26.46■■□□□ 1.83
NINLQ9Y2I6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
NINLQ9Y2I6 AL138966.2-201ENST00000621997 464 ntBASIC26.46■■□□□ 1.83
NINLQ9Y2I6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
NINLQ9Y2I6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
NINLQ9Y2I6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NINLQ9Y2I6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
NINLQ9Y2I6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 TSPY21P-201ENST00000433481 731 ntBASIC26.45■■□□□ 1.82
NINLQ9Y2I6 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC26.45■■□□□ 1.82
NINLQ9Y2I6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC26.44■■□□□ 1.82
NINLQ9Y2I6 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC26.43■■□□□ 1.82
NINLQ9Y2I6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms