Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF6Q9Y252 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF6Q9Y252 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF6Q9Y252 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 AC120498.9-201ENST00000339021 3867 ntBASIC18.17■□□□□ 0.5
RNF6Q9Y252 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 POM121L13P-201ENST00000422362 380 ntBASIC18.17■□□□□ 0.5
RNF6Q9Y252 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 MIR4497-201ENST00000583208 89 ntBASIC18.17■□□□□ 0.5
RNF6Q9Y252 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF6Q9Y252 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF6Q9Y252 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 AC005082.1-201ENST00000413042 2259 ntBASIC18.16■□□□□ 0.5
RNF6Q9Y252 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 C2orf69P4-201ENST00000565394 541 ntBASIC18.16■□□□□ 0.5
RNF6Q9Y252 Z99916.2-201ENST00000604037 246 ntBASIC18.16■□□□□ 0.5
RNF6Q9Y252 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
RNF6Q9Y252 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF6Q9Y252 AL032819.2-201ENST00000624543 2162 ntBASIC18.15■□□□□ 0.5
RNF6Q9Y252 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
RNF6Q9Y252 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF6Q9Y252 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms