Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 MIR1233-2-201ENST00000408138 82 ntBASIC18.28■□□□□ 0.52
LHX6Q9UPM6 MIR1233-1-201ENST00000408722 82 ntBASIC18.28■□□□□ 0.52
LHX6Q9UPM6 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 AC004980.1-204ENST00000429707 299 ntBASIC18.28■□□□□ 0.52
LHX6Q9UPM6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 AL671883.3-201ENST00000603274 991 ntBASIC18.28■□□□□ 0.52
LHX6Q9UPM6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
LHX6Q9UPM6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 AC244015.2-201ENST00000616358 1861 ntBASIC18.27■□□□□ 0.52
LHX6Q9UPM6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.27■□□□□ 0.52
LHX6Q9UPM6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 AC104692.2-201ENST00000603054 253 ntBASIC18.27■□□□□ 0.52
LHX6Q9UPM6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 MIR2861-201ENST00000636310 90 ntBASIC18.27■□□□□ 0.52
LHX6Q9UPM6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
LHX6Q9UPM6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LHX6Q9UPM6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LHX6Q9UPM6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LHX6Q9UPM6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
LHX6Q9UPM6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LHX6Q9UPM6 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LHX6Q9UPM6 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 AC092338.2-201ENST00000568827 1415 ntBASIC18.26■□□□□ 0.51
LHX6Q9UPM6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 HMGN1P19-201ENST00000436976 333 ntBASIC18.26■□□□□ 0.51
LHX6Q9UPM6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 AC120114.3-201ENST00000611923 658 ntBASIC18.26■□□□□ 0.51
LHX6Q9UPM6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.26■□□□□ 0.51
LHX6Q9UPM6 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 LINC01311-201ENST00000565162 1445 ntBASIC18.25■□□□□ 0.51
LHX6Q9UPM6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 AC004951.3-201ENST00000418645 1148 ntBASIC18.25■□□□□ 0.51
LHX6Q9UPM6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
LHX6Q9UPM6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms