Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 SLC25A1P4-201ENST00000567977 778 ntBASIC20.48■□□□□ 0.87
CDH9Q9ULB4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH9Q9ULB4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 CRYGFP-201ENST00000418459 633 ntBASIC20.47■□□□□ 0.87
CDH9Q9ULB4 ECEL1P3-201ENST00000427961 737 ntBASIC20.47■□□□□ 0.87
CDH9Q9ULB4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.47■□□□□ 0.87
CDH9Q9ULB4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH9Q9ULB4 AC096733.2-201ENST00000609937 1394 ntBASIC20.46■□□□□ 0.87
CDH9Q9ULB4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 AC012306.2-201ENST00000609350 630 ntBASIC20.46■□□□□ 0.87
CDH9Q9ULB4 AC097493.4-201ENST00000641197 219 ntBASIC20.46■□□□□ 0.87
CDH9Q9ULB4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.46■□□□□ 0.87
CDH9Q9ULB4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDH9Q9ULB4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CDH9Q9ULB4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 NAPSB-206ENST00000562112 1266 ntBASIC20.45■□□□□ 0.86
CDH9Q9ULB4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDH9Q9ULB4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 CYP2D8P-201ENST00000433633 1490 ntBASIC20.44■□□□□ 0.86
CDH9Q9ULB4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 MFAP1P1-201ENST00000442257 1255 ntBASIC20.44■□□□□ 0.86
CDH9Q9ULB4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.44■□□□□ 0.86
CDH9Q9ULB4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms