Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
NXF1Q9UBU9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.8■□□□□ 0.92
NXF1Q9UBU9 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 TSPY7P-201ENST00000431358 1114 ntBASIC20.8■□□□□ 0.92
NXF1Q9UBU9 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 SNORA78-201ENST00000459373 127 ntBASIC20.8■□□□□ 0.92
NXF1Q9UBU9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NXF1Q9UBU9 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 KRT16P1-201ENST00000399124 1418 ntBASIC20.79■□□□□ 0.92
NXF1Q9UBU9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 AL445675.2-201ENST00000620291 557 ntBASIC20.79■□□□□ 0.92
NXF1Q9UBU9 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NXF1Q9UBU9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 ZNF815P-204ENST00000434898 1737 ntBASIC20.78■□□□□ 0.92
NXF1Q9UBU9 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
NXF1Q9UBU9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 AL596275.1-201ENST00000423464 877 ntBASIC20.77■□□□□ 0.92
NXF1Q9UBU9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
NXF1Q9UBU9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
NXF1Q9UBU9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
NXF1Q9UBU9 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.77■□□□□ 0.91
NXF1Q9UBU9 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.76■□□□□ 0.91
NXF1Q9UBU9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms