Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 KRT8P9-201ENST00000558927 1449 ntBASIC19.24■□□□□ 0.67
SPASTQ9UBP0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SPASTQ9UBP0 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 LINC01568-207ENST00000641790 1380 ntBASIC19.23■□□□□ 0.67
SPASTQ9UBP0 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 AC005363.2-201ENST00000618631 242 ntBASIC19.23■□□□□ 0.67
SPASTQ9UBP0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.23■□□□□ 0.67
SPASTQ9UBP0 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 RNF165-205ENST00000588679 2904 ntBASIC19.22■□□□□ 0.67
SPASTQ9UBP0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 AL390955.1-201ENST00000428694 934 ntBASIC19.22■□□□□ 0.67
SPASTQ9UBP0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SPASTQ9UBP0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 TMPOP1-202ENST00000424642 1267 ntBASIC19.21■□□□□ 0.67
SPASTQ9UBP0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SPASTQ9UBP0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.2■□□□□ 0.66
SPASTQ9UBP0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms