Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
THUMPD1Q9NXG2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 AC097658.1-201ENST00000475555 843 ntBASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 ZNF815P-204ENST00000434898 1737 ntBASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
THUMPD1Q9NXG2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 YBX1P10-201ENST00000444752 975 ntBASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 RPS2P52-201ENST00000469610 820 ntBASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
THUMPD1Q9NXG2 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 AP006587.1-201ENST00000534129 1502 ntBASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 NCF1B-203ENST00000435988 1254 ntBASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
THUMPD1Q9NXG2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.14■□□□□ 0.5
THUMPD1Q9NXG2 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
THUMPD1Q9NXG2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
THUMPD1Q9NXG2 AC141586.3-201ENST00000562166 1838 ntBASIC18.14■□□□□ 0.5
THUMPD1Q9NXG2 AC020763.4-201ENST00000623414 4170 ntBASIC18.14■□□□□ 0.49
THUMPD1Q9NXG2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms