Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PCDH9Q9HC56 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 KRT17P3-201ENST00000420566 1262 ntBASIC19.97■□□□□ 0.79
PCDH9Q9HC56 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
PCDH9Q9HC56 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 POU5F1P3-201ENST00000428824 1078 ntBASIC19.96■□□□□ 0.79
PCDH9Q9HC56 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 AL121906.2-201ENST00000621597 723 ntBASIC19.96■□□□□ 0.79
PCDH9Q9HC56 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
PCDH9Q9HC56 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 TSPY20P-201ENST00000450910 630 ntBASIC19.95■□□□□ 0.78
PCDH9Q9HC56 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PCDH9Q9HC56 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 AC006058.3-201ENST00000606217 1069 ntBASIC19.94■□□□□ 0.78
PCDH9Q9HC56 AL121829.2-201ENST00000620908 328 ntBASIC19.94■□□□□ 0.78
PCDH9Q9HC56 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PCDH9Q9HC56 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 AL138781.2-201ENST00000617896 1843 ntBASIC19.93■□□□□ 0.78
PCDH9Q9HC56 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 FAM201B-201ENST00000458407 597 ntBASIC19.93■□□□□ 0.78
PCDH9Q9HC56 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.93■□□□□ 0.78
PCDH9Q9HC56 AC069544.1-201ENST00000609399 999 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms