Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.52■■□□□ 1.03
ATP6V0A4Q9HBG4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP6V0A4Q9HBG4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 AC116562.2-201ENST00000507042 360 ntBASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 AP000525.1-201ENST00000608286 694 ntBASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 AC079598.2-202ENST00000546624 1451 ntBASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP6V0A4Q9HBG4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP6V0A4Q9HBG4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 MIR1238-201ENST00000408483 83 ntBASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 AL160286.2-201ENST00000567150 934 ntBASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 MIR6786-201ENST00000616843 113 ntBASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP6V0A4Q9HBG4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 FSCN1P1-201ENST00000568912 1481 ntBASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 TMPOP1-202ENST00000424642 1267 ntBASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ATP6V0A4Q9HBG4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 LINC01465-201ENST00000408887 1940 ntBASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 MESTP1-201ENST00000404287 994 ntBASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 B3GAT3P1-201ENST00000471720 806 ntBASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.47■■□□□ 1.03
ATP6V0A4Q9HBG4 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms