Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 FAM21FP-204ENST00000608637 956 ntBASIC18.42■□□□□ 0.54
VCX3BQ9H321 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.42■□□□□ 0.54
VCX3BQ9H321 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 AC141586.3-201ENST00000562166 1838 ntBASIC18.42■□□□□ 0.54
VCX3BQ9H321 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
VCX3BQ9H321 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 SRD5A1P1-201ENST00000442297 786 ntBASIC18.41■□□□□ 0.54
VCX3BQ9H321 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 AC136469.2-201ENST00000623944 1028 ntBASIC18.41■□□□□ 0.54
VCX3BQ9H321 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 AC141586.5-201ENST00000624546 2050 ntBASIC18.41■□□□□ 0.54
VCX3BQ9H321 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
VCX3BQ9H321 ABALON-201ENST00000629058 1903 ntBASIC18.41■□□□□ 0.54
VCX3BQ9H321 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
VCX3BQ9H321 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
VCX3BQ9H321 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 AL139384.1-201ENST00000612143 3047 ntBASIC18.4■□□□□ 0.54
VCX3BQ9H321 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VCX3BQ9H321 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.4■□□□□ 0.54
VCX3BQ9H321 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.4■□□□□ 0.54
VCX3BQ9H321 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.4■□□□□ 0.54
VCX3BQ9H321 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
VCX3BQ9H321 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.4■□□□□ 0.54
VCX3BQ9H321 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
VCX3BQ9H321 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.39■□□□□ 0.54
VCX3BQ9H321 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.39■□□□□ 0.54
VCX3BQ9H321 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.39■□□□□ 0.54
VCX3BQ9H321 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
VCX3BQ9H321 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
VCX3BQ9H321 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
VCX3BQ9H321 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms