Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH23Q9H251 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH23Q9H251 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
CDH23Q9H251 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH23Q9H251 FAM220CP-201ENST00000395253 831 ntBASIC20.6■□□□□ 0.89
CDH23Q9H251 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH23Q9H251 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.6■□□□□ 0.89
CDH23Q9H251 KRT16P4-201ENST00000453883 522 ntBASIC20.6■□□□□ 0.89
CDH23Q9H251 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC20.6■□□□□ 0.89
CDH23Q9H251 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 LINC00167-201ENST00000530583 1419 ntBASIC20.6■□□□□ 0.89
CDH23Q9H251 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH23Q9H251 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH23Q9H251 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDH23Q9H251 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 TPSP2-201ENST00000561760 610 ntBASIC20.6■□□□□ 0.89
CDH23Q9H251 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH23Q9H251 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH23Q9H251 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH23Q9H251 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 AF228730.7-201ENST00000641842 219 ntBASIC20.6■□□□□ 0.89
CDH23Q9H251 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDH23Q9H251 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH23Q9H251 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH23Q9H251 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH23Q9H251 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH23Q9H251 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH23Q9H251 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH23Q9H251 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
CDH23Q9H251 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH23Q9H251 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH23Q9H251 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH23Q9H251 AL162741.1-201ENST00000565563 1558 ntBASIC20.59■□□□□ 0.89
CDH23Q9H251 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH23Q9H251 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH23Q9H251 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDH23Q9H251 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH23Q9H251 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.59■□□□□ 0.89
CDH23Q9H251 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH23Q9H251 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.59■□□□□ 0.89
CDH23Q9H251 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CDH23Q9H251 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDH23Q9H251 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CDH23Q9H251 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.58■□□□□ 0.89
CDH23Q9H251 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH23Q9H251 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH23Q9H251 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH23Q9H251 AC079776.4-201ENST00000511039 504 ntBASIC20.58■□□□□ 0.89
CDH23Q9H251 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH23Q9H251 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH23Q9H251 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDH23Q9H251 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.58■□□□□ 0.89
CDH23Q9H251 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH23Q9H251 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH23Q9H251 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH23Q9H251 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH23Q9H251 BX276092.5-203ENST00000456199 560 ntBASIC20.58■□□□□ 0.88
CDH23Q9H251 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.88
CDH23Q9H251 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDH23Q9H251 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDH23Q9H251 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH23Q9H251 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH23Q9H251 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDH23Q9H251 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH23Q9H251 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH23Q9H251 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH23Q9H251 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH23Q9H251 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.57■□□□□ 0.88
CDH23Q9H251 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH23Q9H251 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDH23Q9H251 DPP3P2-201ENST00000416030 1696 ntBASIC20.56■□□□□ 0.88
CDH23Q9H251 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH23Q9H251 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH23Q9H251 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH23Q9H251 AL121912.1-201ENST00000603683 238 ntBASIC20.56■□□□□ 0.88
CDH23Q9H251 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH23Q9H251 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.56■□□□□ 0.88
CDH23Q9H251 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH23Q9H251 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH23Q9H251 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH23Q9H251 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CDH23Q9H251 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH23Q9H251 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms