Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SMOQ99835 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.33■□□□□ 0.85
SMOQ99835 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.33■□□□□ 0.85
SMOQ99835 FITM1-202ENST00000559294 800 ntBASIC20.33■□□□□ 0.85
SMOQ99835 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.33■□□□□ 0.85
SMOQ99835 DGCR10-201ENST00000609839 495 ntBASIC20.33■□□□□ 0.85
SMOQ99835 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.33■□□□□ 0.84
SMOQ99835 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
SMOQ99835 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMOQ99835 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMOQ99835 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.33■□□□□ 0.84
SMOQ99835 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMOQ99835 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SMOQ99835 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SMOQ99835 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.33■□□□□ 0.84
SMOQ99835 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.32■□□□□ 0.84
SMOQ99835 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.32■□□□□ 0.84
SMOQ99835 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SMOQ99835 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SMOQ99835 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.32■□□□□ 0.84
SMOQ99835 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
SMOQ99835 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.32■□□□□ 0.84
SMOQ99835 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.32■□□□□ 0.84
SMOQ99835 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.32■□□□□ 0.84
SMOQ99835 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.32■□□□□ 0.84
SMOQ99835 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC20.32■□□□□ 0.84
SMOQ99835 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.32■□□□□ 0.84
SMOQ99835 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SMOQ99835 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.32■□□□□ 0.84
SMOQ99835 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMOQ99835 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMOQ99835 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 Z82202.1-201ENST00000623446 1880 ntBASIC20.31■□□□□ 0.84
SMOQ99835 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMOQ99835 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SMOQ99835 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.31■□□□□ 0.84
SMOQ99835 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.31■□□□□ 0.84
SMOQ99835 AC211429.1-201ENST00000415277 523 ntBASIC20.31■□□□□ 0.84
SMOQ99835 FAM207BP-201ENST00000447172 505 ntBASIC20.31■□□□□ 0.84
SMOQ99835 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 AC097488.1-201ENST00000507834 756 ntBASIC20.31■□□□□ 0.84
SMOQ99835 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC20.31■□□□□ 0.84
SMOQ99835 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.31■□□□□ 0.84
SMOQ99835 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SMOQ99835 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
SMOQ99835 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.3■□□□□ 0.84
SMOQ99835 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SMOQ99835 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SMOQ99835 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.3■□□□□ 0.84
SMOQ99835 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SMOQ99835 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.3■□□□□ 0.84
SMOQ99835 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.3■□□□□ 0.84
SMOQ99835 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.3■□□□□ 0.84
SMOQ99835 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.3■□□□□ 0.84
SMOQ99835 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SMOQ99835 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SMOQ99835 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
SMOQ99835 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
SMOQ99835 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.29■□□□□ 0.84
SMOQ99835 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.29■□□□□ 0.84
SMOQ99835 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
SMOQ99835 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.29■□□□□ 0.84
SMOQ99835 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SMOQ99835 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.29■□□□□ 0.84
SMOQ99835 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.29■□□□□ 0.84
SMOQ99835 SLC25A1P4-201ENST00000567977 778 ntBASIC20.29■□□□□ 0.84
SMOQ99835 AP005242.2-201ENST00000580065 1175 ntBASIC20.29■□□□□ 0.84
SMOQ99835 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.29■□□□□ 0.84
SMOQ99835 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SMOQ99835 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms