Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SPENQ96T58 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SPENQ96T58 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
SPENQ96T58 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SPENQ96T58 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPENQ96T58 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPENQ96T58 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.49■□□□□ 0.39
SPENQ96T58 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SPENQ96T58 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SPENQ96T58 AC112907.2-201ENST00000448639 330 ntBASIC17.49■□□□□ 0.39
SPENQ96T58 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.49■□□□□ 0.39
SPENQ96T58 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.49■□□□□ 0.39
SPENQ96T58 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.49■□□□□ 0.39
SPENQ96T58 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SPENQ96T58 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.49■□□□□ 0.39
SPENQ96T58 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.49■□□□□ 0.39
SPENQ96T58 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.49■□□□□ 0.39
SPENQ96T58 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 AL023973.1-201ENST00000624619 620 ntBASIC17.48■□□□□ 0.39
SPENQ96T58 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SPENQ96T58 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 AL645929.1-201ENST00000420084 975 ntBASIC17.48■□□□□ 0.39
SPENQ96T58 HOMER2P1-201ENST00000455653 964 ntBASIC17.48■□□□□ 0.39
SPENQ96T58 PRSS44-201ENST00000515154 1146 ntBASIC17.48■□□□□ 0.39
SPENQ96T58 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.48■□□□□ 0.39
SPENQ96T58 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
SPENQ96T58 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.48■□□□□ 0.39
SPENQ96T58 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.48■□□□□ 0.39
SPENQ96T58 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
SPENQ96T58 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SPENQ96T58 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SPENQ96T58 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SPENQ96T58 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.47■□□□□ 0.39
SPENQ96T58 AC009078.2-202ENST00000463353 338 ntBASIC17.47■□□□□ 0.39
SPENQ96T58 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
SPENQ96T58 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.47■□□□□ 0.39
SPENQ96T58 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.47■□□□□ 0.39
SPENQ96T58 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.47■□□□□ 0.39
SPENQ96T58 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.47■□□□□ 0.39
SPENQ96T58 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.47■□□□□ 0.39
SPENQ96T58 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.47■□□□□ 0.39
SPENQ96T58 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.47■□□□□ 0.39
SPENQ96T58 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SPENQ96T58 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.47■□□□□ 0.39
SPENQ96T58 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SPENQ96T58 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.46■□□□□ 0.39
SPENQ96T58 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.46■□□□□ 0.39
SPENQ96T58 AC104692.2-201ENST00000603054 253 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 AC099343.3-201ENST00000605834 2503 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SPENQ96T58 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SPENQ96T58 EMBP1-201ENST00000458200 901 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 UNC93B7-201ENST00000509439 705 ntBASIC17.46■□□□□ 0.39
SPENQ96T58 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms