Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SNX18Q96RF0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX18Q96RF0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX18Q96RF0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SNX18Q96RF0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX18Q96RF0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX18Q96RF0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.57■□□□□ 0.4
SNX18Q96RF0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
SNX18Q96RF0 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SNX18Q96RF0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SNX18Q96RF0 AC116351.2-201ENST00000606540 1585 ntBASIC17.57■□□□□ 0.4
SNX18Q96RF0 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.56■□□□□ 0.4
SNX18Q96RF0 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 Z82202.1-201ENST00000623446 1880 ntBASIC17.56■□□□□ 0.4
SNX18Q96RF0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SNX18Q96RF0 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.56■□□□□ 0.4
SNX18Q96RF0 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.55■□□□□ 0.4
SNX18Q96RF0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 MIR4758-201ENST00000577688 71 ntBASIC17.55■□□□□ 0.4
SNX18Q96RF0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 TMEM191A-211ENST00000637163 1067 ntBASIC17.55■□□□□ 0.4
SNX18Q96RF0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SNX18Q96RF0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.55■□□□□ 0.4
SNX18Q96RF0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SNX18Q96RF0 MIPEPP3-201ENST00000412105 444 ntBASIC17.54■□□□□ 0.4
SNX18Q96RF0 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.54■□□□□ 0.4
SNX18Q96RF0 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms