Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 AC006058.3-201ENST00000606217 1069 ntBASIC18.26■□□□□ 0.51
COL21A1Q96P44 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COL21A1Q96P44 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.26■□□□□ 0.51
COL21A1Q96P44 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 AL121906.2-201ENST00000621597 723 ntBASIC18.25■□□□□ 0.51
COL21A1Q96P44 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.25■□□□□ 0.51
COL21A1Q96P44 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL21A1Q96P44 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 AL032819.2-201ENST00000624543 2162 ntBASIC18.24■□□□□ 0.51
COL21A1Q96P44 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 AC018553.1-201ENST00000616682 1458 ntBASIC18.24■□□□□ 0.51
COL21A1Q96P44 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL21A1Q96P44 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COL21A1Q96P44 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 AC116351.2-201ENST00000606540 1585 ntBASIC18.23■□□□□ 0.51
COL21A1Q96P44 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 AC069544.1-201ENST00000609399 999 ntBASIC18.23■□□□□ 0.51
COL21A1Q96P44 AL121829.2-201ENST00000620908 328 ntBASIC18.23■□□□□ 0.51
COL21A1Q96P44 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.23■□□□□ 0.51
COL21A1Q96P44 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.23■□□□□ 0.51
COL21A1Q96P44 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL21A1Q96P44 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL21A1Q96P44 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL21A1Q96P44 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms