Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00479Q96M42 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
LINC00479Q96M42 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00479Q96M42 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00479Q96M42 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 AC142381.2-201ENST00000566120 298 ntBASIC14.77□□□□□ -0.05
LINC00479Q96M42 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00479Q96M42 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 HCG11-201ENST00000411553 5696 ntBASIC14.77□□□□□ -0.05
LINC00479Q96M42 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
LINC00479Q96M42 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00479Q96M42 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00479Q96M42 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 GAS2L1P2-201ENST00000436355 1356 ntBASIC14.76□□□□□ -0.05
LINC00479Q96M42 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 AL139246.5-201ENST00000606645 996 ntBASIC14.76□□□□□ -0.05
LINC00479Q96M42 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 BICD1-207ENST00000551848 1962 ntBASIC14.76□□□□□ -0.05
LINC00479Q96M42 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00479Q96M42 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00479Q96M42 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 TERF1P5-201ENST00000477545 1207 ntBASIC14.75□□□□□ -0.05
LINC00479Q96M42 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 MYCNOS-205ENST00000641950 531 ntBASIC14.75□□□□□ -0.05
LINC00479Q96M42 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00479Q96M42 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00479Q96M42 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms