Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 AL732292.2-201ENST00000609649 430 ntBASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRIM43Q96BQ3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRIM43Q96BQ3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRIM43Q96BQ3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 TSPY19P-201ENST00000418461 509 ntBASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 TSPY18P-201ENST00000441642 509 ntBASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 AC079781.3-201ENST00000449110 356 ntBASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 AL160237.2-201ENST00000556165 472 ntBASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
TRIM43Q96BQ3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC21.02■□□□□ 0.95
TRIM43Q96BQ3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.02■□□□□ 0.95
TRIM43Q96BQ3 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.95
TRIM43Q96BQ3 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TRIM43Q96BQ3 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.02■□□□□ 0.95
TRIM43Q96BQ3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 AC034232.1-201ENST00000506026 1064 ntBASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
TRIM43Q96BQ3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms