Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 AC005082.1-201ENST00000413042 2259 ntBASIC17.36■□□□□ 0.37
PTP4A1Q93096 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PTP4A1Q93096 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PTP4A1Q93096 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 AL390719.1-204ENST00000412397 1219 ntBASIC17.35■□□□□ 0.37
PTP4A1Q93096 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 AC104771.1-201ENST00000603335 964 ntBASIC17.35■□□□□ 0.37
PTP4A1Q93096 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.35■□□□□ 0.37
PTP4A1Q93096 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
PTP4A1Q93096 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 ID1-201ENST00000376105 1233 ntBASIC17.34■□□□□ 0.37
PTP4A1Q93096 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.34■□□□□ 0.37
PTP4A1Q93096 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.34■□□□□ 0.37
PTP4A1Q93096 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PTP4A1Q93096 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A1Q93096 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
PTP4A1Q93096 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A1Q93096 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A1Q93096 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.33■□□□□ 0.37
PTP4A1Q93096 AC104417.2-201ENST00000562989 1793 ntBASIC17.33■□□□□ 0.37
PTP4A1Q93096 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A1Q93096 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
PTP4A1Q93096 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PTP4A1Q93096 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A1Q93096 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PTP4A1Q93096 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A1Q93096 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.33■□□□□ 0.36
PTP4A1Q93096 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PTP4A1Q93096 HLA-L-209ENST00000420110 1011 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PTP4A1Q93096 AC097658.1-201ENST00000475555 843 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 AC091874.3-201ENST00000512672 1195 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.33■□□□□ 0.36
PTP4A1Q93096 AC133041.1-202ENST00000642053 222 ntBASIC17.33■□□□□ 0.36
PTP4A1Q93096 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms