Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.87■■□□□ 1.41
RPGRQ92834 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC23.87■■□□□ 1.41
RPGRQ92834 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC23.87■■□□□ 1.41
RPGRQ92834 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
RPGRQ92834 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
RPGRQ92834 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.86■■□□□ 1.41
RPGRQ92834 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC23.86■■□□□ 1.41
RPGRQ92834 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RPGRQ92834 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.86■■□□□ 1.41
RPGRQ92834 TPM4P1-201ENST00000436100 807 ntBASIC23.86■■□□□ 1.41
RPGRQ92834 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC23.86■■□□□ 1.41
RPGRQ92834 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.86■■□□□ 1.41
RPGRQ92834 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 AL136038.3-201ENST00000561909 1096 ntBASIC23.86■■□□□ 1.41
RPGRQ92834 NEK4P2-201ENST00000580004 1012 ntBASIC23.86■■□□□ 1.41
RPGRQ92834 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.86■■□□□ 1.41
RPGRQ92834 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC23.86■■□□□ 1.41
RPGRQ92834 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RPGRQ92834 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RPGRQ92834 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRQ92834 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC23.85■■□□□ 1.41
RPGRQ92834 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RPGRQ92834 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
RPGRQ92834 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.85■■□□□ 1.41
RPGRQ92834 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RPGRQ92834 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.85■■□□□ 1.41
RPGRQ92834 ZNF444P1-201ENST00000559497 298 ntBASIC23.85■■□□□ 1.41
RPGRQ92834 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.85■■□□□ 1.41
RPGRQ92834 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRQ92834 AC083849.1-201ENST00000615227 514 ntBASIC23.85■■□□□ 1.41
RPGRQ92834 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRQ92834 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRQ92834 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC23.85■■□□□ 1.41
RPGRQ92834 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRQ92834 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
RPGRQ92834 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RPGRQ92834 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
RPGRQ92834 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC23.84■■□□□ 1.41
RPGRQ92834 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.84■■□□□ 1.41
RPGRQ92834 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
RPGRQ92834 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RPGRQ92834 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.41
RPGRQ92834 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.84■■□□□ 1.41
RPGRQ92834 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.84■■□□□ 1.41
RPGRQ92834 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 AL450487.1-201ENST00000426799 995 ntBASIC23.84■■□□□ 1.41
RPGRQ92834 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RPGRQ92834 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.84■■□□□ 1.41
RPGRQ92834 GCSHP2-201ENST00000560971 527 ntBASIC23.84■■□□□ 1.41
RPGRQ92834 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC23.84■■□□□ 1.41
RPGRQ92834 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.84■■□□□ 1.41
RPGRQ92834 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.84■■□□□ 1.41
RPGRQ92834 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.84■■□□□ 1.41
RPGRQ92834 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RPGRQ92834 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.84■■□□□ 1.41
RPGRQ92834 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRQ92834 DET1-207ENST00000564406 2315 ntTSL 2 BASIC23.83■■□□□ 1.41
RPGRQ92834 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC23.83■■□□□ 1.41
RPGRQ92834 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRQ92834 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RPGRQ92834 STARP1-201ENST00000397973 869 ntBASIC23.83■■□□□ 1.41
RPGRQ92834 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RPGRQ92834 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.83■■□□□ 1.41
RPGRQ92834 NDUFV2-AS1-203ENST00000608008 779 ntBASIC23.83■■□□□ 1.41
RPGRQ92834 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC23.83■■□□□ 1.41
RPGRQ92834 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RPGRQ92834 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC23.83■■□□□ 1.4
RPGRQ92834 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
RPGRQ92834 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRQ92834 AC009237.14-201ENST00000609975 1594 ntBASIC23.82■■□□□ 1.4
RPGRQ92834 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRQ92834 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRQ92834 ANKRD18DP-204ENST00000455355 1975 ntBASIC23.82■■□□□ 1.4
RPGRQ92834 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RPGRQ92834 FXN-203ENST00000396366 922 ntTSL 2 BASIC23.82■■□□□ 1.4
RPGRQ92834 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.82■■□□□ 1.4
RPGRQ92834 PP7080-204ENST00000510714 601 ntTSL 3 BASIC23.82■■□□□ 1.4
RPGRQ92834 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC23.82■■□□□ 1.4
RPGRQ92834 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.82■■□□□ 1.4
RPGRQ92834 CLEC4GP1-201ENST00000596555 870 ntBASIC23.82■■□□□ 1.4
RPGRQ92834 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms