Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 AF186192.3-201ENST00000583427 947 ntBASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 AL445675.2-201ENST00000620291 557 ntBASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC148Q8NFR7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC22.29■■□□□ 1.16
CCDC148Q8NFR7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 KSR1P1-201ENST00000446298 240 ntBASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 AC073195.1-201ENST00000607241 877 ntBASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 AP006294.2-201ENST00000641667 209 ntBASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC148Q8NFR7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 RPS2P55-201ENST00000397318 883 ntBASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 AC107956.1-201ENST00000494359 873 ntBASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 AP001412.1-201ENST00000608405 714 ntBASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 AC104417.2-201ENST00000562989 1793 ntBASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC148Q8NFR7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
CCDC148Q8NFR7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 MIR718-201ENST00000390190 70 ntBASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 AC008550.1-201ENST00000511500 884 ntBASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 AC233702.5-201ENST00000584107 538 ntBASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC148Q8NFR7 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms