Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 KRT17P2-201ENST00000300992 1314 ntBASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LINC01555Q8NAE3 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.64■□□□□ 0.58
LINC01555Q8NAE3 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.64■□□□□ 0.58
LINC01555Q8NAE3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LINC01555Q8NAE3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LINC01555Q8NAE3 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 AC007952.6-201ENST00000573168 2673 ntBASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 AC003957.1-201ENST00000625108 2673 ntBASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 AL355075.4-201ENST00000554988 638 ntBASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LINC01555Q8NAE3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
LINC01555Q8NAE3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 AC091390.4-202ENST00000476426 537 ntBASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 AC130371.2-201ENST00000619443 611 ntBASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 FSCN1P1-201ENST00000568912 1481 ntBASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.62■□□□□ 0.57
LINC01555Q8NAE3 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.61■□□□□ 0.57
LINC01555Q8NAE3 AC004951.3-201ENST00000418645 1148 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms