Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 ZNF815P-204ENST00000434898 1737 ntBASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.14■□□□□ 0.65
CPNE9Q8IYJ1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 ESRRAP1-201ENST00000400596 1257 ntBASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 KRT17P3-201ENST00000420566 1262 ntBASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 TUBB8P6-201ENST00000436895 1288 ntBASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
CPNE9Q8IYJ1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 AC018445.3-201ENST00000624177 1945 ntBASIC19.12■□□□□ 0.65
CPNE9Q8IYJ1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 MTDHP1-201ENST00000605323 784 ntBASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE9Q8IYJ1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE9Q8IYJ1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms