Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 AC083849.1-201ENST00000615227 514 ntBASIC20.95■□□□□ 0.94
HERC6Q8IVU3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 AC006128.1-201ENST00000624704 1661 ntBASIC20.95■□□□□ 0.94
HERC6Q8IVU3 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.95■□□□□ 0.94
HERC6Q8IVU3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.94■□□□□ 0.94
HERC6Q8IVU3 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.94■□□□□ 0.94
HERC6Q8IVU3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 CKBP1-201ENST00000565489 1086 ntBASIC20.94■□□□□ 0.94
HERC6Q8IVU3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HERC6Q8IVU3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 AP000523.1-201ENST00000398242 1049 ntBASIC20.93■□□□□ 0.94
HERC6Q8IVU3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HERC6Q8IVU3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 ATP5G2P1-201ENST00000433580 426 ntBASIC20.92■□□□□ 0.94
HERC6Q8IVU3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 HYMAI.1-201ENST00000620949 238 ntBASIC20.92■□□□□ 0.94
HERC6Q8IVU3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
HERC6Q8IVU3 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
HERC6Q8IVU3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.9■□□□□ 0.94
HERC6Q8IVU3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERC6Q8IVU3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.9■□□□□ 0.94
HERC6Q8IVU3 AC092720.2-201ENST00000602388 1665 ntBASIC20.9■□□□□ 0.94
HERC6Q8IVU3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.9■□□□□ 0.94
HERC6Q8IVU3 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
HERC6Q8IVU3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms