Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 AC006557.6-201ENST00000623071 864 ntBASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CCDC50Q8IVM0 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 TFP1-202ENST00000475455 1573 ntBASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
CCDC50Q8IVM0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 AC124283.5-201ENST00000624661 1809 ntBASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 AC092118.2-201ENST00000613495 667 ntBASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CCDC50Q8IVM0 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 AC073210.2-201ENST00000430369 194 ntBASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 AC091874.3-201ENST00000512672 1195 ntBASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CCDC50Q8IVM0 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms