Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 C1QL1P1-201ENST00000568105 661 ntBASIC20.5■□□□□ 0.87
RNF135Q8IUD6 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RNF135Q8IUD6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 AC092720.2-201ENST00000602388 1665 ntBASIC20.49■□□□□ 0.87
RNF135Q8IUD6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 AC011558.1-201ENST00000623459 338 ntBASIC20.49■□□□□ 0.87
RNF135Q8IUD6 AC116562.4-202ENST00000641738 218 ntBASIC20.49■□□□□ 0.87
RNF135Q8IUD6 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.49■□□□□ 0.87
RNF135Q8IUD6 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 DPP3P2-201ENST00000416030 1696 ntBASIC20.48■□□□□ 0.87
RNF135Q8IUD6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 SMG8-203ENST00000578922 2178 ntBASIC20.48■□□□□ 0.87
RNF135Q8IUD6 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.48■□□□□ 0.87
RNF135Q8IUD6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.48■□□□□ 0.87
RNF135Q8IUD6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RNF135Q8IUD6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 HLA-G-202ENST00000376815 851 ntBASIC20.46■□□□□ 0.87
RNF135Q8IUD6 HLA-G-203ENST00000376818 1127 ntBASIC20.46■□□□□ 0.87
RNF135Q8IUD6 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 AC004980.1-204ENST00000429707 299 ntBASIC20.46■□□□□ 0.87
RNF135Q8IUD6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 AC116407.4-201ENST00000623319 1061 ntBASIC20.46■□□□□ 0.87
RNF135Q8IUD6 AC141257.4-201ENST00000634557 245 ntBASIC20.46■□□□□ 0.87
RNF135Q8IUD6 AC136944.6-201ENST00000634818 245 ntBASIC20.46■□□□□ 0.87
RNF135Q8IUD6 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RNF135Q8IUD6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms