Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SLC52A2-207ENST00000526891 592 ntTSL 418.16■□□□□ 0.54e-8■■□□□ 13.4
SND1Q7KZF4 SLC43A3-208ENST00000526621 562 ntTSL 414.17□□□□□ -0.145e-9■■□□□ 13.4
SND1Q7KZF4 SLC43A3-216ENST00000529896 494 ntTSL 414.02□□□□□ -0.175e-9■■□□□ 13.4
SND1Q7KZF4 PNP-208ENST00000557229 992 ntTSL 1 (best)13.06□□□□□ -0.325e-9■■□□□ 13.4
SND1Q7KZF4 TUBBP1-201ENST00000248151 1335 ntBASIC11.52□□□□□ -0.575e-9■■□□□ 13.4
SND1Q7KZF4 CA8-201ENST00000317995 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.585e-9■■□□□ 13.4
SND1Q7KZF4 CAVIN2-201ENST00000304141 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.595e-9■■□□□ 13.4
SND1Q7KZF4 TUBBP1-202ENST00000518096 1646 ntBASIC11.17□□□□□ -0.625e-9■■□□□ 13.4
SND1Q7KZF4 LEPROT-203ENST00000484243 549 ntTSL 38.69□□□□□ -1.025e-9■■□□□ 13.4
SND1Q7KZF4 CA8-203ENST00000528666 510 ntTSL 38.23□□□□□ -1.095e-9■■□□□ 13.4
SND1Q7KZF4 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.135e-9■■□□□ 13.4
SND1Q7KZF4 ARL6IP6-204ENST00000463690 1402 ntTSL 27.14□□□□□ -1.275e-9■■□□□ 13.4
SND1Q7KZF4 ARL6IP6-202ENST00000425034 465 ntTSL 27.12□□□□□ -1.275e-9■■□□□ 13.4
SND1Q7KZF4 PNP-203ENST00000553591 770 ntTSL 57.09□□□□□ -1.275e-9■■□□□ 13.4
SND1Q7KZF4 ARL6IP6-203ENST00000455875 479 ntTSL 25.81□□□□□ -1.485e-9■■□□□ 13.4
SND1Q7KZF4 NQO1-203ENST00000379047 2527 ntTSL 1 (best) BASIC9.72□□□□□ -0.859e-7■■□□□ 13.4
SND1Q7KZF4 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.029e-7■■□□□ 13.4
SND1Q7KZF4 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC8.37□□□□□ -1.079e-7■■□□□ 13.4
SND1Q7KZF4 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.75□□□□□ -1.179e-7■■□□□ 13.4
SND1Q7KZF4 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.41□□□□□ -1.229e-7■■□□□ 13.4
SND1Q7KZF4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.41□□□□□ -1.549e-7■■□□□ 13.4
SND1Q7KZF4 SLC39A7-204ENST00000463972 1410 ntTSL 214.02□□□□□ -0.163e-8■■□□□ 13.4
SND1Q7KZF4 LAMA5-201ENST00000252999 11426 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.381e-9■■□□□ 13.4
SND1Q7KZF4 GLB1-218ENST00000497796 899 ntTSL 316.41■□□□□ 0.224e-10■■□□□ 13.4
SND1Q7KZF4 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.141e-8■■□□□ 13.4
SND1Q7KZF4 DNAJC3-201ENST00000376795 2273 ntTSL 5 BASIC10.19□□□□□ -0.781e-8■■□□□ 13.4
SND1Q7KZF4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.81e-9■■□□□ 13.4
SND1Q7KZF4 ACP2-207ENST00000529663 967 ntTSL 1 (best)16.27■□□□□ 0.21e-7■■□□□ 13.4
SND1Q7KZF4 ACP2-211ENST00000531547 980 ntTSL 214.81□□□□□ -0.041e-7■■□□□ 13.4
SND1Q7KZF4 TGFBI-208ENST00000508767 582 ntTSL 36.3□□□□□ -1.43e-10■■□□□ 13.4
SND1Q7KZF4 RNASEK-C17orf49-202ENST00000547863 1662 ntTSL 224.64■■□□□ 1.532e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-205ENST00000552176 1485 ntTSL 224.51■■□□□ 1.512e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-C17orf49-204ENST00000607564 892 ntTSL 523.15■■□□□ 1.32e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-C17orf49-203ENST00000549775 1856 ntTSL 522.09■■□□□ 1.132e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-209ENST00000575822 613 ntTSL 320.53■□□□□ 0.882e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.33■□□□□ 0.852e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-201ENST00000546395 952 ntTSL 1 (best)17.74■□□□□ 0.432e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.74■□□□□ 0.432e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-206ENST00000552321 739 ntTSL 217.53■□□□□ 0.42e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.91■□□□□ 0.32e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.212e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.142e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.11□□□□□ -0.152e-6■■□□□ 13.4
SND1Q7KZF4 RNASEK-208ENST00000570898 425 ntTSL 3 BASIC11.39□□□□□ -0.592e-6■■□□□ 13.4
SND1Q7KZF4 NCEH1-202ENST00000424772 921 ntTSL 213.59□□□□□ -0.232e-6■■□□□ 13.4
SND1Q7KZF4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.17■□□□□ 0.988e-12■■□□□ 13.4
SND1Q7KZF4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.42■□□□□ 0.228e-12■■□□□ 13.4
SND1Q7KZF4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.4■□□□□ 0.068e-12■■□□□ 13.4
SND1Q7KZF4 NFE2L1-212ENST00000581319 481 ntTSL 39.49□□□□□ -0.898e-12■■□□□ 13.4
SND1Q7KZF4 PSMA4-214ENST00000559906 583 ntTSL 25.28□□□□□ -1.562e-10■■□□□ 13.4
SND1Q7KZF4 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.288e-7■■□□□ 13.4
SND1Q7KZF4 NCEH1-201ENST00000421723 602 ntTSL 214.56□□□□□ -0.083e-6■■□□□ 13.4
SND1Q7KZF4 DDB1-218ENST00000540784 1119 ntTSL 316.13■□□□□ 0.171e-6■■□□□ 13.4
SND1Q7KZF4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.013e-6■■□□□ 13.4
SND1Q7KZF4 GHDC-205ENST00000585735 940 ntTSL 221.33■■□□□ 1.013e-6■■□□□ 13.4
SND1Q7KZF4 PIGG-207ENST00000504187 1784 ntTSL 217.47■□□□□ 0.393e-6■■□□□ 13.4
SND1Q7KZF4 PIGG-212ENST00000506898 832 ntTSL 316.87■□□□□ 0.293e-6■■□□□ 13.4
SND1Q7KZF4 PIGG-211ENST00000506402 2387 ntTSL 1 (best)16.51■□□□□ 0.233e-6■■□□□ 13.4
SND1Q7KZF4 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC14.71□□□□□ -0.053e-6■■□□□ 13.4
SND1Q7KZF4 PIGG-205ENST00000503111 2629 ntTSL 2 BASIC14.26□□□□□ -0.133e-6■■□□□ 13.4
SND1Q7KZF4 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC13.51□□□□□ -0.253e-6■■□□□ 13.4
SND1Q7KZF4 ATP5A1-218ENST00000592364 576 ntTSL 512.44□□□□□ -0.421e-8■■□□□ 13.4
SND1Q7KZF4 ECE1-207ENST00000470394 486 ntTSL 28.85□□□□□ -0.993e-6■■□□□ 13.4
SND1Q7KZF4 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -15e-9■■□□□ 13.4
SND1Q7KZF4 C4BPA-202ENST00000421786 708 ntTSL 48.06□□□□□ -1.123e-6■■□□□ 13.4
SND1Q7KZF4 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.25e-9■■□□□ 13.4
SND1Q7KZF4 CLTC-211ENST00000579815 609 ntTSL 57.36□□□□□ -1.231e-9■■□□□ 13.4
SND1Q7KZF4 XRCC5-207ENST00000471649 610 ntTSL 26.59□□□□□ -1.353e-6■■□□□ 13.4
SND1Q7KZF4 CRTAP-203ENST00000485310 562 ntTSL 45.52□□□□□ -1.532e-6■■□□□ 13.4
SND1Q7KZF4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.495e-7■■□□□ 13.4
SND1Q7KZF4 SLC2A8-209ENST00000451404 992 ntTSL 322.18■■□□□ 1.145e-7■■□□□ 13.4
SND1Q7KZF4 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC21.05■□□□□ 0.965e-7■■□□□ 13.4
SND1Q7KZF4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.21■□□□□ 0.675e-7■■□□□ 13.4
SND1Q7KZF4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.49■□□□□ 0.395e-7■■□□□ 13.4
SND1Q7KZF4 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.511e-6■■□□□ 13.4
SND1Q7KZF4 SLC43A3-211ENST00000529112 653 ntTSL 515.14■□□□□ 0.011e-9■■□□□ 13.4
SND1Q7KZF4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.345e-7■■□□□ 13.4
SND1Q7KZF4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC22.82■■□□□ 1.245e-7■■□□□ 13.4
SND1Q7KZF4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.77■□□□□ 0.765e-7■■□□□ 13.4
SND1Q7KZF4 P3H1-206ENST00000447502 453 ntTSL 310.58□□□□□ -0.722e-8■■□□□ 13.4
SND1Q7KZF4 CERS2-206ENST00000421609 738 ntTSL 326.33■■□□□ 1.812e-7■■□□□ 13.4
SND1Q7KZF4 CERS2-211ENST00000559020 594 ntTSL 415.06■□□□□ 02e-7■■□□□ 13.4
SND1Q7KZF4 GLO1-201ENST00000373365 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.088e-8■■□□□ 13.4
SND1Q7KZF4 GLO1-202ENST00000470973 1939 ntTSL 28.53□□□□□ -1.048e-8■■□□□ 13.4
SND1Q7KZF4 DDB1-207ENST00000535967 1404 ntTSL 313.15□□□□□ -0.39e-7■■□□□ 13.3
SND1Q7KZF4 DDB1-209ENST00000537877 1375 ntTSL 212.86□□□□□ -0.359e-7■■□□□ 13.3
SND1Q7KZF4 CCT2-209ENST00000550455 481 ntTSL 210.7□□□□□ -0.79e-11■■□□□ 13.3
SND1Q7KZF4 STIP1-212ENST00000544739 562 ntTSL 36.97□□□□□ -1.291e-8■■□□□ 13.3
SND1Q7KZF4 STIP1-206ENST00000538497 582 ntTSL 26□□□□□ -1.451e-8■■□□□ 13.3
SND1Q7KZF4 STIP1-205ENST00000537479 601 ntTSL 26□□□□□ -1.451e-8■■□□□ 13.3
SND1Q7KZF4 OCIAD1-225ENST00000512981 1209 ntTSL 49.5□□□□□ -0.892e-7■■□□□ 13.3
SND1Q7KZF4 OCIAD1-209ENST00000505922 555 ntTSL 57.89□□□□□ -1.152e-7■■□□□ 13.3
SND1Q7KZF4 AL022318.4-201ENST00000381568 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.321e-11■■□□□ 13.3
SND1Q7KZF4 APOBEC3C-201ENST00000361441 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.51e-11■■□□□ 13.3
SND1Q7KZF4 APOBEC3C-202ENST00000428892 1056 ntTSL 311.12□□□□□ -0.631e-11■■□□□ 13.3
SND1Q7KZF4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.03■□□□□ 0.642e-14■■□□□ 13.3
SND1Q7KZF4 HM13-211ENST00000468559 675 ntTSL 513.14□□□□□ -0.312e-15■■□□□ 13.3
SND1Q7KZF4 HM13-215ENST00000474466 440 ntTSL 310.69□□□□□ -0.73e-15■■□□□ 13.3
SND1Q7KZF4 HSPA8-222ENST00000534319 1884 ntTSL 2 BASIC13.07□□□□□ -0.322e-21■■□□□ 13.3
SND1Q7KZF4 HSPA8-215ENST00000532091 2301 ntTSL 512.2□□□□□ -0.462e-21■■□□□ 13.3
Retrieved 100 of 13,567 protein–RNA pairs in 134.8 ms