Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
HIST2H3AQ71DI3 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 AC087289.5-201ENST00000586076 3175 ntBASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 KRT17P3-201ENST00000420566 1262 ntBASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 MTDHP1-201ENST00000605323 784 ntBASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.98■□□□□ 0.31
HIST2H3AQ71DI3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 PRKY-204ENST00000533551 1019 ntBASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 AC069544.1-201ENST00000609399 999 ntBASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 AC018445.3-201ENST00000624177 1945 ntBASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HIST2H3AQ71DI3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HIST2H3AQ71DI3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIST2H3AQ71DI3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HIST2H3AQ71DI3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
HIST2H3AQ71DI3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HIST2H3AQ71DI3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms