Protein–RNA interactions for Protein: Q6NTF9

RHBDD2, Rhomboid domain-containing protein 2, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD2Q6NTF9 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 INGX-201ENST00000359239 846 ntBASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 AC010653.2-201ENST00000623505 997 ntBASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RHBDD2Q6NTF9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 AC092338.2-201ENST00000568827 1415 ntBASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 HMGA1P5-201ENST00000412453 271 ntBASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 LIN28AP1-201ENST00000429574 405 ntBASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 KRT18P57-201ENST00000443599 1254 ntBASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 TSPY17P-201ENST00000450329 467 ntBASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 AL023803.3-201ENST00000615559 522 ntBASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RHBDD2Q6NTF9 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 KRT8P11-201ENST00000409686 1436 ntBASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 AC010203.1-204ENST00000548782 407 ntBASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.16■□□□□ 0.5
RHBDD2Q6NTF9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 AC007663.1-201ENST00000438948 1240 ntBASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 ATP5G1P1-201ENST00000448724 379 ntBASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RHBDD2Q6NTF9 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.14■□□□□ 0.5
RHBDD2Q6NTF9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RHBDD2Q6NTF9 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDD2Q6NTF9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RHBDD2Q6NTF9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.14■□□□□ 0.49
RHBDD2Q6NTF9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RHBDD2Q6NTF9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms