Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.29■□□□□ 0.84
RNF43Q68DV7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RNF43Q68DV7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.28■□□□□ 0.84
RNF43Q68DV7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RNF43Q68DV7 PHGDH-210ENST00000641115 1638 ntBASIC20.27■□□□□ 0.84
RNF43Q68DV7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
RNF43Q68DV7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF43Q68DV7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.27■□□□□ 0.84
RNF43Q68DV7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RNF43Q68DV7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 AF186192.3-201ENST00000583427 947 ntBASIC20.27■□□□□ 0.84
RNF43Q68DV7 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RNF43Q68DV7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RNF43Q68DV7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
RNF43Q68DV7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.27■□□□□ 0.83
RNF43Q68DV7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 RN7SL850P-201ENST00000579959 291 ntBASIC20.26■□□□□ 0.83
RNF43Q68DV7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
RNF43Q68DV7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RNF43Q68DV7 HTR7P1-201ENST00000538670 1336 ntBASIC20.26■□□□□ 0.83
RNF43Q68DV7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 AL353807.1-201ENST00000427475 662 ntBASIC20.25■□□□□ 0.83
RNF43Q68DV7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 AC004264.1-201ENST00000608354 794 ntBASIC20.25■□□□□ 0.83
RNF43Q68DV7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RNF43Q68DV7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.25■□□□□ 0.83
RNF43Q68DV7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms