Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VPS13DQ5THJ4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 KRT8P11-201ENST00000409686 1436 ntBASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 KRT16P6-202ENST00000425692 1426 ntBASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 LINC01311-201ENST00000565162 1445 ntBASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 AP005901.3-202ENST00000581653 237 ntBASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 AC012313.10-201ENST00000623509 926 ntBASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 AC104417.2-201ENST00000562989 1793 ntBASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VPS13DQ5THJ4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 MIR662-201ENST00000384847 95 ntBASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.04□□□□□ -0.32
VPS13DQ5THJ4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 AC112907.2-201ENST00000448639 330 ntBASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
VPS13DQ5THJ4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 LINC00565-201ENST00000562710 2331 ntBASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
VPS13DQ5THJ4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.02□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms