Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 KRT18P16-201ENST00000510337 1294 ntBASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 CD177P1-201ENST00000606252 935 ntBASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 AL023875.1-201ENST00000640777 796 ntBASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 NBPF21P-201ENST00000425093 1451 ntBASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.62■■□□□ 1.05
HERC4Q5GLZ8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 TSPY15P-201ENST00000457163 923 ntBASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.61■■□□□ 1.05
HERC4Q5GLZ8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 TUBB8P6-201ENST00000436895 1288 ntBASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HERC4Q5GLZ8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 KRT8P8-201ENST00000434750 1448 ntBASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HERC4Q5GLZ8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HERC4Q5GLZ8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
HERC4Q5GLZ8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms