Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC9.72□□□□□ -0.85
LINC01554Q52M75 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01554Q52M75 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
LINC01554Q52M75 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
LINC01554Q52M75 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 LBX2-AS1-202ENST00000603175 2083 ntBASIC9.71□□□□□ -0.85
LINC01554Q52M75 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC9.71□□□□□ -0.85
LINC01554Q52M75 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC9.71□□□□□ -0.85
LINC01554Q52M75 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC9.71□□□□□ -0.85
LINC01554Q52M75 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
LINC01554Q52M75 AL390961.4-201ENST00000623958 2535 ntBASIC9.71□□□□□ -0.85
LINC01554Q52M75 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
LINC01554Q52M75 AC009102.2-201ENST00000606772 1639 ntBASIC9.71□□□□□ -0.86
LINC01554Q52M75 AC135776.1-201ENST00000319817 2481 ntBASIC9.71□□□□□ -0.86
LINC01554Q52M75 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 FST-202ENST00000396947 2538 ntTSL 5 BASIC9.71□□□□□ -0.86
LINC01554Q52M75 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 SNAI3-AS1-205ENST00000568633 2096 ntBASIC9.7□□□□□ -0.86
LINC01554Q52M75 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 CD72-202ENST00000378430 585 ntTSL 3 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC9.7□□□□□ -0.86
LINC01554Q52M75 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
LINC01554Q52M75 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms